stephens999 / ashrLinks
An R package for adaptive shrinkage
☆87Updated 6 months ago
Alternatives and similar repositories for ashr
Users that are interested in ashr are comparing it to the libraries listed below
Sorting:
- An R package for multivariate adaptive shrinkage.☆93Updated last year
- GridLMM package☆39Updated 3 months ago
- Mixed models @lme4 + custom covariances + parameter constraints☆53Updated 5 years ago
- A matrix-like wrapper around PLINK .bed files☆19Updated last year
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Updated 3 years ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated last year
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆44Updated last year
- ☆96Updated last year
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆48Updated 6 years ago
- Effective Computing—Resources for Computational Biologists☆27Updated 5 years ago
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- Glimma R package☆50Updated last year
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Updated 4 months ago
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/☆104Updated last month
- R package for Empirical Bayes Factor Analysis.☆52Updated last year
- Vennerable provides Venn diagrams in R. It displays Venn and Euler diagrams for up to 9 different sets and using a variety of geometries.…☆91Updated 5 years ago
- R pkg for Hierarchical Dirichlet Process☆81Updated 2 years ago
- fastqcr: Quality Control of Sequencing Data☆77Updated 2 years ago
- ☆53Updated 6 months ago
- pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data☆56Updated 2 months ago
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated 2 years ago
- A Suite of Packages for Analysis of Big Genomic Data☆34Updated last year
- Tidy up computational biology objects☆50Updated 7 years ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 4 years ago
- LASSO for GWAS with summary statistics☆78Updated 5 years ago
- Independent Hypothesis Weighting☆16Updated 2 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Learn and validate subtypes from multiple traits☆20Updated 4 years ago
- ldshrink: a one-stop R package for shrinkage estimation of linkage disequilibrium☆13Updated 4 years ago
- Teaching material for Summer Institute in Statistics for Big Data Module 1.☆65Updated 6 months ago