Alternatives and similar repositories for ashr:

Users that are interested in ashr are comparing it to the libraries listed below

• variani / lme4qtl
  Mixed models @lme4 + custom covariances + parameter constraints
  ☆52Updated 4 years ago
• stephenslab / mashr
  An R package for multivariate adaptive shrinkage.
  ☆91Updated 4 months ago
• const-ae / tidygenomics
  Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/
  ☆103Updated 3 years ago
• deruncie / GridLMM
  GridLMM package
  ☆39Updated last month
• kevinblighe / RegParallel
  Standard regression functions in R enabled for parallel processing over large data-frames.
  ☆38Updated last year
• willtownes / glmpca
  ☆94Updated 10 months ago
• hhhh5 / ewastools
  A collection of functions for working with DNA methylation microarrays (quality control, pre-processing, LC estimation, ...)
  ☆25Updated last year
• andywdahl / rgwas
  Learn and validate subtypes from multiple traits
  ☆20Updated 3 years ago
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆41Updated 3 months ago
• stephenslab / effective-computing
  Effective Computing—Resources for Computational Biologists
  ☆26Updated 4 years ago
• OchoaLab / genio
  Statistical GENetics Input/Output Functions
  ☆18Updated 2 weeks ago
• tidyomics / plyranges
  A grammar of genomic data transformation
  ☆143Updated 3 months ago
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆70Updated last year
• nicolaroberts / hdp
  R pkg for Hierarchical Dirichlet Process
  ☆74Updated last year
• mhahsler / seriation
  Infrastructure for Ordering using Seriation - R Package
  ☆77Updated 3 months ago
• js229 / Vennerable
  Vennerable provides Venn diagrams in R. It displays Venn and Euler diagrams for up to 9 different sets and using a variety of geometries.…
  ☆91Updated 4 years ago
• YuLab-SMU / aplot
  Decorate a plot with associated information
  ☆103Updated 2 weeks ago
• lawremi / ggbio
  Grid and ggplot2 based visualization for biological data
  ☆111Updated last year
• hansenlab / minfi
  Devel repository for minfi
  ☆60Updated 10 months ago
• robjohnnoble / ggmuller
  Create Muller Plots of Evolutionary Dynamics
  ☆65Updated last year
• yaowuliu / ACAT
  ☆32Updated 3 years ago
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated 2 months ago
• StoreyLab / biobroom
  Tidy up computational biology objects
  ☆49Updated 6 years ago
• SaskiaFreytag / schex
  ☆74Updated last year
• tpq / propr
  [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data
  ☆71Updated last month
• stephenslab / susieR
  R package for "sum of single effects" regression.
  ☆198Updated last week
• QuantGen / BGData
  A Suite of Packages for Analysis of Big Genomic Data
  ☆34Updated last month
• hanchenphd / GMMAT
  Generalized linear Mixed Model Association Tests
  ☆39Updated last year
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆71Updated last month
• SISBID / Unsupervised-Learning
  ☆49Updated 6 months ago