StanfordBioinformatics / mvp_aaa_codelabsLinks
Queries to perform qc and analysis on genomes in BigQuery
☆22Updated 8 years ago
Alternatives and similar repositories for mvp_aaa_codelabs
Users that are interested in mvp_aaa_codelabs are comparing it to the libraries listed below
Sorting:
- Flexible Integration of Data with Deep LEarning☆50Updated 2 years ago
- An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data☆33Updated 3 years ago
- Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …☆61Updated 9 years ago
- Library for manipulating genomic variants and predicting their effects☆84Updated last year
- Learn interpretable computational phenotyping models from k-merized genomic data☆52Updated 3 years ago
- Official code repository for GATK versions 1.0 through 3.7 (full licensed package). For GATK 4 code, see the https://github.com/broadinst…☆143Updated 6 years ago
- Browser for ExAC consortium data☆106Updated 3 years ago
- Fast and memory-efficient sequencing error corrector☆93Updated last year
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆98Updated 7 years ago
- DSDE Deep Learning Club☆40Updated 6 years ago
- Efficient handling of FASTQ files from Python☆51Updated last week
- GenomicsDB☆111Updated 2 years ago
- Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data☆293Updated 2 weeks ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated 2 years ago
- Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework☆71Updated 2 years ago
- A collection of well-known bioinformatics programs.☆25Updated 10 years ago
- NGS course☆34Updated 8 years ago
- ☆45Updated 9 years ago
- Models and APIs for Genomic data. RETIRED 2018-01-24☆218Updated 2 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Updated 9 years ago
- Python library and scripts for retrieval and storage of genomics data in HDF5 format☆26Updated 6 years ago
- A scalable genome browser. Apache 2 licensed.☆125Updated 2 years ago
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Updated 7 years ago
- Analysis examples based on the ISB-CGC hosted TCGA data, using Python and IPython Notebooks.☆54Updated 6 years ago
- A toolkit to learn how to model and interpret regulatory sequence data using deep learning.☆261Updated 2 years ago
- Population Stratification Analysis on Genomics Data Using Deep Learning☆26Updated 8 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- Reproducible machine learning analysis of gene expression and alternative splicing data☆126Updated 2 years ago
- Server wrapper that turns command line tools into web services☆60Updated 7 years ago
- Documentation for the Google Genomics cookbook.☆141Updated 5 years ago