Alternatives and similar repositories for aws-healthomics-tools

Users that are interested in aws-healthomics-tools are comparing it to the libraries listed below

• aws-samples / aws-healthomics-tutorials
  ☆79Updated last week
• aws / amazon-genomics-cli
  ☆147Updated last year
• 4dn-dcic / tibanna
  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…
  ☆69Updated 3 months ago
• basespace / basespace-python-sdk
  BaseSpace Python SDK
  ☆37Updated 3 years ago
• aws-samples / aws-genomics-workflows
  Genomics Workflows on AWS
  ☆147Updated last year
• urmi-21 / pyrpipe
  Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.
  ☆84Updated 4 years ago
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆43Updated last year
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆90Updated 3 months ago
• UMMS-Biocore / dolphinnext
  A graphical user interface for distributed data processing of high throughput genomics
  ☆5Updated last year
• MaayanLab / maayanlab-bioinformatics
  A collection of useful functions for bioinformatics data analysis
  ☆24Updated last month
• grst / snakemake_nextflow_wdl
  simple comparison of snakemake, nextflow and cromwell/wdl
  ☆49Updated 4 years ago
• goodwright / nextflow.py
  Python wrapper around Nextflow.
  ☆59Updated last week
• seqeralabs / nf-tower
  Nextflow Tower system
  ☆151Updated 5 months ago
• StanfordBioinformatics / Hummingbird
  Hummingbird: Efficient Performance Prediction for Executing Genomic Applications in the Cloud: https://doi.org/10.1093/bioinformatics/bta…
  ☆21Updated 11 months ago
• stjudecloud / workflows
  Bioinformatics workflows developed for and used on the St. Jude Cloud project.
  ☆36Updated this week
• NIGMS / NIGMS-Sandbox
  Collection of cloud-based biomedical data science learning modules funded by the National Institute of General Medical Sciences at the NI…
  ☆74Updated last month
• earlham-sherlock / earlham-sherlock.github.io
  an open source data platform, developed in the Korcsmaros Group to store, analyze and integrate bioinformatics data
  ☆11Updated 4 years ago
• ucscXena / xenaPython
  Python API for Xena Hub
  ☆53Updated 2 years ago
• bigbio / nf-workflows
  Repository of Nextflow+BioContainers workflows
  ☆14Updated 3 years ago
• broadinstitute / cromwell-tools
  A collection of Python clients and accessory scripts for interacting with the Cromwell
  ☆22Updated 2 years ago
• nextflow-io / rnaseq-nf
  A proof of concept of RNAseq pipeline
  ☆77Updated last month
• ncbi / clinvar
  ClinVar aggregates information about genomic variation and its relationship to human health. Contact us at 'clinvar@ncbi.nlm.nih.gov…
  ☆81Updated 7 months ago
• EGA-archive / ega-download-client
  A Python-based EGA download client
  ☆101Updated 9 months ago
• dceoy / pdbio
  Pandas-based Data Handler for VCF, BED, and SAM Files
  ☆32Updated 3 years ago
• ohsu-comp-bio / g2p-aggregator
  Associations of genomic features, drugs and diseases
  ☆48Updated 2 years ago
• awslabs / linter-rules-for-nextflow
  Linter rules for Nextflow DSL scripts
  ☆34Updated last week
• mpg-age-bioinformatics / AGEpy
  Bioinformatics tools for Python
  ☆25Updated 7 months ago
• dnanexus / dxCompiler
  WDL and CWL compiler for the DNAnexus platform
  ☆34Updated last week
• broadinstitute / genomics-in-the-cloud
  Source code and related materials for the O'Reilly book
  ☆96Updated 2 years ago
• seqeralabs / nextflow-tutorial
  Nextflow training material for introductory tutorial
  ☆105Updated 3 years ago