The mutex watershed for image segmentation.
☆68May 6, 2021Updated 5 years ago
Alternatives and similar repositories for mutex-watershed
Users that are interested in mutex-watershed are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Affinity based segmentation algorithms and tools☆11May 12, 2025Updated last year
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Jun 23, 2021Updated 4 years ago
- ☆17Feb 3, 2018Updated 8 years ago
- Tool for graph-based image segmentation and analysis☆22Nov 12, 2017Updated 8 years ago
- ☆10Jan 7, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A curated list of resources for 3D segmentation of neurites in EM images☆57Mar 11, 2024Updated 2 years ago
- PyTorch Connectomics: segmentation toolbox for EM connectomics☆192Updated this week
- Flood filling networks for segmenting electron microscopy of neural tissue☆25Dec 26, 2022Updated 3 years ago
- 🌈☆69Oct 10, 2025Updated 7 months ago
- ☆11Jun 11, 2020Updated 5 years ago
- Automatic segmentation of electron microscopy volumes☆30Oct 23, 2012Updated 13 years ago
- ☆22Jan 6, 2026Updated 4 months ago
- Python scripts to read and write the CREMI hdf5 file format.☆39Mar 21, 2023Updated 3 years ago
- Distributed Proofreading of Automatic Segmentations☆15Sep 30, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Superhuman Accuracy on the SNEMI3D Connectomics Challenge☆14Feb 28, 2018Updated 8 years ago
- A nifty library for graph based image segmentation.☆47May 3, 2025Updated last year
- Simple watershed and agglomeration library for affinity graphs.☆30Sep 18, 2025Updated 8 months ago
- Pytorch implementation of the LearnedRandomWalker module☆29Oct 28, 2020Updated 5 years ago
- ☆15Dec 19, 2022Updated 3 years ago
- official implementation of the PatchPerPix instance segmentation method☆35Jun 27, 2023Updated 2 years ago
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Mar 6, 2026Updated 2 months ago
- Course and exercises on deep learning for microscopy image analysis☆23Nov 25, 2025Updated 6 months ago
- ☆18Dec 26, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Generalized algorithm for agglomerative clustering of signed graphs☆14Dec 16, 2021Updated 4 years ago
- Neurotransmitter prediction from EM.☆16Feb 28, 2025Updated last year
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆207May 20, 2026Updated last week
- Utils and convenience functions for large-scale bio-image analysis.☆64Updated this week
- Command line tool for registration of very large 3D volumes.☆16Jan 28, 2026Updated 4 months ago
- Block-wise task scheduling for large nD volumes.☆32May 4, 2026Updated 3 weeks ago
- Automatic segmentation of electron microscopy volumes☆80Jan 15, 2021Updated 5 years ago
- Automated quantification of fibrous networks☆12Mar 10, 2026Updated 2 months ago
- ☆12May 21, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- EfficientUnet☆11Oct 26, 2020Updated 5 years ago
- Caffe: a fast open framework for deep learning. With OpenCL and CUDA support.☆87Aug 18, 2018Updated 7 years ago
- Rhoana - Dense Automated Neuron Annotation pipeline☆29May 4, 2017Updated 9 years ago
- Graphs and Graph Algorithms in C++, including Minimum Cost (Lifted) Multicuts☆242Sep 10, 2023Updated 2 years ago
- Code for "3D Instance Segmentation via Multi-Task Metric Learning"☆11Sep 22, 2020Updated 5 years ago
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- Implementation of Watershed segmentation in Python☆13Jun 4, 2022Updated 3 years ago