Rhoana / rhoanaLinks
Rhoana - Dense Automated Neuron Annotation pipeline
☆28Updated 8 years ago
Alternatives and similar repositories for rhoana
Users that are interested in rhoana are comparing it to the libraries listed below
Sorting:
- Automatic segmentation of electron microscopy volumes☆77Updated 4 years ago
- Semi automated image analysis toolkit for Connectomics☆12Updated 6 years ago
- Documentations of BigNeuron Project progress☆24Updated 9 years ago
- Tool for graph-based image segmentation and analysis☆22Updated 8 years ago
- Automatic cell detection in microscopy data using convolutional networks☆34Updated 3 years ago
- ☆51Updated 7 years ago
- jupyter notebook extension to visualize numpy arrays with the neuroglancer☆28Updated 7 years ago
- A general illumination correction method for optical microscopy.☆42Updated 4 years ago
- Flood filling networks for segmenting electron microscopy of neural tissue☆25Updated 3 years ago
- TensorFlow Deconvolution for Microscopy Data☆91Updated 3 years ago
- Aligner for large scale serial section image data☆16Updated 2 years ago
- Matlab implementation of continuous max flow variants☆21Updated 9 years ago
- Binary releases of Vaa3D and related software components☆45Updated 2 years ago
- A fast and cross-platform image analysis framework for fluorescence time-lapse microscopy and bioimage informatics.☆45Updated last year
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- Software package for neuron reconstruction and visualization☆40Updated 7 months ago
- Flood-Filling Networks for instance segmentation in 3d volumes.☆340Updated 2 weeks ago
- This repository contains python implementations on Low-rank-plus-sparse, Atlas-to-image Registration (pyLAR) framework and its applicatio…☆23Updated 8 years ago
- benchmarking challenge for finding neurons in imaging data☆75Updated 6 years ago
- www.vaa3d.org☆80Updated 7 years ago
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆93Updated last year
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆25Updated 8 months ago
- WebGL-based viewer for volumetric data☆24Updated 2 weeks ago
- MALIS structured loss function for supervised learning of segmentation and clustering☆18Updated 2 years ago
- A library to facilitate machine learning on multi-dimensional images.☆87Updated this week
- Python library for creating flow networks and computing the maxflow/mincut (aka graph-cuts for Python)☆254Updated last year
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18Updated 5 years ago
- Matlab function to import ROIs from ImageJ☆27Updated 6 years ago
- A unified environment for DNN-based automated segmentation of neuronal EM images☆38Updated last year
- ☆40Updated 5 years ago