Rhoana / rhoanaLinks
Rhoana - Dense Automated Neuron Annotation pipeline
☆28Updated 8 years ago
Alternatives and similar repositories for rhoana
Users that are interested in rhoana are comparing it to the libraries listed below
Sorting:
- Automatic segmentation of electron microscopy volumes☆77Updated 4 years ago
- Semi automated image analysis toolkit for Connectomics☆12Updated 6 years ago
- Flood filling networks for segmenting electron microscopy of neural tissue☆23Updated 2 years ago
- Documentations of BigNeuron Project progress☆24Updated 9 years ago
- Tool for graph-based image segmentation and analysis☆21Updated 7 years ago
- Aligner for large scale serial section image data☆16Updated 2 years ago
- Matlab implementation of continuous max flow variants☆21Updated 8 years ago
- ☆49Updated 7 years ago
- MALIS structured loss function for supervised learning of segmentation and clustering☆18Updated 2 years ago
- Automatic segmentation of electron microscopy volumes☆31Updated 12 years ago
- A fast and cross-platform image analysis framework for fluorescence time-lapse microscopy and bioimage informatics.☆44Updated last year
- Python library for creating flow networks and computing the maxflow/mincut (aka graph-cuts for Python)☆251Updated 9 months ago
- Predictive Image Registration☆138Updated 6 years ago
- Python module to analyse skeleton (thin object) images☆129Updated last month
- Software package for neuron reconstruction and visualization☆39Updated 2 months ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- Chan-Vese level-sets in Python☆95Updated 4 years ago
- jupyter notebook extension to visualize numpy arrays with the neuroglancer☆27Updated 6 years ago
- ☆40Updated 5 years ago
- A unified environment for DNN-based automated segmentation of neuronal EM images☆37Updated 11 months ago
- This is an alpha version of the Max-tree toolbox.☆13Updated 5 years ago
- This repository contains python implementations on Low-rank-plus-sparse, Atlas-to-image Registration (pyLAR) framework and its applicatio…☆23Updated 8 years ago
- Binary releases of Vaa3D and related software components☆45Updated last year
- A highly configurable toolkit for training 3D/2D CNNs and general Neural Networks (superceded by https://github.com/ELEKTRONN/elektronn3)☆40Updated 3 years ago
- Variational Time-Implicit LevelSets for Image Segmentation☆13Updated 9 years ago
- GPU accelerated volume rendering / processing in Python☆118Updated 6 years ago
- ☆17Updated 7 years ago
- ImageJ/Fiji plugin to analyze 2D and 3D skeleton images☆28Updated 3 years ago
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆86Updated last year
- A curated list of Python projects for non-rigid (i.e. elastic) image registration☆32Updated last year