Alternatives and similar repositories for ffn

Users that are interested in ffn are comparing it to the libraries listed below

• cremi / cremi_python
  Python scripts to read and write the CREMI hdf5 file format.
  ☆38Updated 2 years ago
• google-deepmind / multidim-image-augmentation
  This package provides TensorFlow Ops for multidimensional volumetric image augmentation.
  ☆134Updated 4 months ago
• RivuletStudio / rivuletpy
  Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…
  ☆69Updated 2 years ago
• seung-lab / kimimaro
  Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)
  ☆157Updated 2 weeks ago
• seung-lab / cloud-volume
  Read and write Neuroglancer datasets programmatically.
  ☆154Updated 2 weeks ago
• DLTK / models
  DLTK Model Zoo
  ☆114Updated 7 years ago
• Rhoana / biologicalgraphs
  Biologically-Constrained Graphs for Global Connectomics Reconstruction
  ☆10Updated 4 years ago
• josedolz / LiviaNET
  This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convoluti…
  ☆164Updated 5 years ago
• axondeepseg / axondeepseg
  Axon/Myelin segmentation using Deep Learning
  ☆122Updated this week
• aschampion / diluvian
  Flood filling networks for segmenting electron microscopy of neural tissue
  ☆23Updated 2 years ago
• zudi-lin / pytorch_connectomics
  PyTorch Connectomics: segmentation toolbox for EM connectomics
  ☆179Updated last week
• mhe / pynrrd
  Simple pure-python module for reading and writing nrrd files.
  ☆122Updated 5 months ago
• analysiscenter / radio
  RadIO is a library for data science research of computed tomography imaging
  ☆224Updated 3 years ago
• funkelab / lsd
  🌈
  ☆57Updated 2 months ago
• google / microscopeimagequality
  ☆90Updated last year
• google / in-silico-labeling
  Code for In silico labeling: Predicting fluorescent labels in unlabeled images
  ☆261Updated 4 years ago
• mirzaevinom / data_science_bowl_2018
  My 5th place (out of 816 teams) solution to The 2018 Data Science Bowl organized by Booz Allen Hamilton
  ☆158Updated 6 years ago
• alxndrkalinin / awesome-deepneuroimage
  A curated list of awesome deep learning applications in the field of neurological image analysis
  ☆152Updated 7 years ago
• sciai-lab / mutex-watershed
  The mutex watershed for image segmentation.
  ☆67Updated 4 years ago
• chuckyee / cardiac-segmentation
  Right Ventricle Cardiac MRI Segmentation
  ☆279Updated 7 years ago
• deepmedic / dense3dCrf
  Fully-connected (dense) 3D CRF for processing biomedical scans
  ☆138Updated 6 years ago
• google-deepmind / tcia-ct-scan-dataset
  Dataset of head and neck CT scans and segmentations in NRRD format.
  ☆94Updated 4 years ago
• CRBS / cdeep3m
  Please go to https://github.com/CRBS/cdeep3m2 for most recent version
  ☆59Updated 5 years ago
• seung-lab / igneous
  Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
  ☆49Updated this week
• janelia-flyem / gala
  Automatic segmentation of electron microscopy volumes
  ☆77Updated 4 years ago
• urakubo / UNI-EM
  A unified environment for DNN-based automated segmentation of neuronal EM images
  ☆37Updated 9 months ago
• ELEKTRONN / elektronn3
  A PyTorch-based library for working with 3D and 2D convolutional neural networks, with focus on semantic segmentation of volumetric biome…
  ☆165Updated last year
• jni / skan
  Python module to analyse skeleton (thin object) images
  ☆126Updated 3 weeks ago
• renato145 / fastai_scans
  Fastai extension to work with 3d medical images
  ☆41Updated 6 years ago
• funkey / waterz
  Simple watershed and agglomeration library for affinity graphs.
  ☆22Updated 7 months ago