☆55Jul 26, 2026Updated 2 weeks ago
Alternatives and similar repositories for peartree
Users that are interested in peartree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Main development repository for SpreadGL☆23Jun 18, 2026Updated last month
- Repo for PrimerSchemes☆19Jul 6, 2026Updated last month
- Primalscheme3. Generation of highly multiplex primerschemes☆27Dec 4, 2025Updated 8 months ago
- Inferring global and local strict molecular clocks using root-to-tip regression☆20Jun 30, 2026Updated last month
- Rapid & standardized genome annotation using protein structural information☆72Jul 2, 2026Updated last month
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆46Updated this week
- Precise host read removal☆128Apr 13, 2026Updated 3 months ago
- Computation of average nucleotide identity with the use of MMseqs2☆24Dec 11, 2024Updated last year
- IQ-TREE version 3: software for phylogenetics☆151Aug 3, 2026Updated last week
- ☆22Jul 25, 2026Updated 2 weeks ago
- A mathematically characterized hypothesis test for organism presence/absence in a metagenome☆37Apr 26, 2026Updated 3 months ago
- Fast DNA search and [host] depletion using minimizers☆120Updated this week
- Simple Manipulation Of Trees☆14Aug 16, 2025Updated 11 months ago
- WITCH is a multiple sequence alignment method that uses multiple weighted HMMs to align unaligned sequences and find consensuses.☆13Nov 18, 2025Updated 8 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆23Jul 22, 2026Updated 2 weeks ago
- ☆16Apr 11, 2026Updated 3 months ago
- Quality control for phylogenetic analyses☆13Jul 13, 2026Updated 3 weeks ago
- Efficient phylogenetic tree inference for massive taxonomic datasets☆147Apr 6, 2025Updated last year
- BEAV: Bacterial Element Annotation reVamped☆77Aug 21, 2025Updated 11 months ago
- Inference of putative transmission phylogenetic clusters☆12Oct 13, 2020Updated 5 years ago
- ☆24Feb 2, 2026Updated 6 months ago
- A tool for exploring large trees in the browser☆133Jul 27, 2026Updated 2 weeks ago
- Basecalling configuration prediction through FASTQ files☆34Mar 17, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Simple-to-use interactive comparison of two bacterial genomes☆28Jan 30, 2026Updated 6 months ago
- Greening lab hydrogenase database☆19Jun 26, 2025Updated last year
- a broadly applicable tool for automated gene identification and retrieval☆42Jun 16, 2026Updated last month
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- INSaFLU-TELEVIR: an free web-based (but also locally installable) bioinformatics suite for virus metagenomic detection and routine genomi…☆43Updated this week
- A comprehensive bacterial core gene-set annotation pipeline based on Roary and pairwise ILPs☆35Dec 4, 2025Updated 8 months ago
- a tool to filter sites in a FASTA-format whole-genome pseudo-alignment☆65Jun 16, 2025Updated last year
- ☆14Oct 29, 2024Updated last year
- A tool in order to accurately remove primer sequences from NGS reads in an amplicon experiment☆20Nov 12, 2025Updated 8 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Create, modify and analyse phylogenetic trees in R☆24Jul 30, 2026Updated last week
- ☆11Jun 29, 2023Updated 3 years ago
- A Python package to update the MLST database for the mlst tool.☆29Jul 22, 2026Updated 2 weeks ago
- Standalone Python re-implementation of the POLCA polisher from MaSuRCA☆47Aug 20, 2025Updated 11 months ago
- Improved Inference of Ortholog Groups using Hidden Markov Models☆39May 12, 2026Updated 2 months ago
- Python tool to reduce size and redundancy of phylogenetic datasets☆56Dec 5, 2025Updated 8 months ago
- From dereplication to genome enrichment: Enhancing genome recovery across metagenomic samples using MAGmax☆37Jun 1, 2026Updated 2 months ago