amulya-prasad / XplainMDView external linksLinks
☆44Apr 12, 2025Updated 10 months ago
Alternatives and similar repositories for XplainMD
Users that are interested in XplainMD are comparing it to the libraries listed below
Sorting:
- ☆12Feb 17, 2023Updated 2 years ago
- RNA Structural Bioinformatics Crash Course & Data Science in Python☆13Oct 19, 2022Updated 3 years ago
- a protein descriptor for site prediction☆16Aug 9, 2019Updated 6 years ago
- Python code to extract features from Protein sequences for Machine Learning/Deep Learning☆20Mar 26, 2022Updated 3 years ago
- Introduction to the Unix Shell for biologists☆23May 3, 2022Updated 3 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- Fast and versatile biomolecular structure PDB file parser using SQL queries☆24Mar 17, 2023Updated 2 years ago
- Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm☆24Mar 26, 2020Updated 5 years ago
- ProFET: Protein Feature Engineering Toolkit for Machine Learning☆58Sep 14, 2015Updated 10 years ago
- Parameter-efficient embeddings for proteins, pretrained using a contrastive loss.☆30Jul 20, 2025Updated 6 months ago
- My computational biology course as it evolves in real time☆14Aug 31, 2021Updated 4 years ago
- Next-Toggle is just a simple plug and use, theme toggle button with multiple light and dark themes.☆11May 9, 2024Updated last year
- ☆13Mar 10, 2019Updated 6 years ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆36Jul 4, 2025Updated 7 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆38Oct 12, 2022Updated 3 years ago
- Statistical Mechanics for Chemistry and Biology☆13Updated this week
- ☆103Updated this week
- A template to create your own literature survey engine☆11Feb 2, 2026Updated last week
- This repository contains a QSAR model that predicts the ability of a chemical compound to inhibit the gene associated with Alzheimer's, B…☆11Oct 1, 2021Updated 4 years ago
- ☆12Apr 14, 2025Updated 10 months ago
- ☆14Oct 5, 2024Updated last year
- Python scripts for Exploratory Data Analysis of Pacific Biosciences sequence data☆18Aug 13, 2014Updated 11 years ago
- Educational Notes on Molecular Modeling☆13Nov 19, 2020Updated 5 years ago
- lncRNA-Py is a development package for applying machine learning and deep learning to the problem of lncRNA classification, i.e. predicti…☆12Jan 24, 2025Updated last year
- MVP for updated PEP 543 proposal☆14Updated this week
- Streamlit web application to deploy a machine learning binary classifier to predict the activity of antimicrobial peptides☆10Dec 13, 2022Updated 3 years ago
- A repository for the Petagraph project☆13Dec 11, 2025Updated 2 months ago
- Calculating paramagnetic NMR effects in proteins☆10May 20, 2022Updated 3 years ago
- ☆12Jan 27, 2023Updated 3 years ago
- Docker image for☆11Dec 25, 2017Updated 8 years ago
- Python package providing functionality and plotting for chemistry method comparison☆15Feb 28, 2024Updated last year
- Time series analysis in R☆14Nov 17, 2025Updated 2 months ago
- ECCpy is a program for EC50 calculation in python.☆44Jul 6, 2023Updated 2 years ago
- Transformer for protein function prediction (version 2)☆15Jan 8, 2026Updated last month
- to assess structural quality of RNA using 3D CNN☆13Aug 17, 2018Updated 7 years ago
- ☆17Jul 21, 2025Updated 6 months ago
- Official implementation of Panacea: A foundation model for clinical trial design, recruitment, search, and summarization.☆17Dec 24, 2024Updated last year
- ☆15Dec 19, 2025Updated last month
- JAX-based differentiable Kohn-Sham Density Functional Theory implementation for training quantum(-enhanced) neural exchange-correlation f…☆18Jan 29, 2026Updated 2 weeks ago