Automated machine learning for analyzing, interpreting, and designing biological sequences
☆173Aug 3, 2023Updated 2 years ago
Alternatives and similar repositories for BioAutoMATED
Users that are interested in BioAutoMATED are comparing it to the libraries listed below
Sorting:
- App for serotonergic targets☆12Jan 8, 2026Updated last month
- Machine learning prediction of enzyme optimum pH☆50Apr 29, 2025Updated 10 months ago
- ☆13Dec 5, 2024Updated last year
- Evaluation dataset for AI systems intended to benchmark capabilities foundational to scientific research in biology☆99Sep 27, 2025Updated 5 months ago
- This repository implements Gibbs sampling with Graph-based Smoothing☆41May 29, 2024Updated last year
- AlphaFold-initiated replica exchange protein docking☆87Jun 5, 2025Updated 8 months ago
- Multivariate vIsualisatioN and OuTlier Analysis Using R☆14Apr 8, 2023Updated 2 years ago
- Analyze and simulate Pool-Seq time series data☆17Jun 16, 2022Updated 3 years ago
- ☆15Aug 6, 2020Updated 5 years ago
- Transformer Based Language Model for Peptide Property Prediction☆49Aug 2, 2024Updated last year
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆115Oct 30, 2025Updated 4 months ago
- ☆30Oct 7, 2025Updated 4 months ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Feb 21, 2024Updated 2 years ago
- ☆101Nov 6, 2025Updated 3 months ago
- Pipeline for Nanopore sequencing: demultiplexing, variant calling, and quality visualization with error handling.☆11Jan 25, 2026Updated last month
- KDS software for Kinase Drug Selectivity☆11Jun 8, 2023Updated 2 years ago
- Automatic extraction of interacting compound-target pairs from ChEMBL.☆21Sep 23, 2025Updated 5 months ago
- Economic Genome Assembly from Low Coverage Illumina and Nanopore Data☆19Feb 15, 2022Updated 4 years ago
- ☆91Sep 25, 2024Updated last year
- [Nature Machine Intelligence] ImmunoStruct enables multimodal deep learning for immunogenicity prediction☆40Updated this week
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆24Aug 20, 2024Updated last year
- ☆21Oct 31, 2024Updated last year
- Geometry-aware protein binding site predictor☆25Aug 29, 2024Updated last year
- CAPLA: improved prediction of protein-ligand binding affinity by a deep learning approach based on a cross-attention mechanism☆25Nov 9, 2022Updated 3 years ago
- Genomic Pre-trained Network☆322Updated this week
- A deep-learning-based multiple toolkits (DeTool) approach that uses the inputs of enzymes and substrates for biocatalystic tasks.☆10Nov 24, 2023Updated 2 years ago
- A Snakemake-based pipeline for gene mapping in Triticeae.☆11Mar 5, 2022Updated 3 years ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- Screen interactions with AlphaFold Multimer☆13Mar 10, 2025Updated 11 months ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 2 months ago
- Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.☆12Feb 12, 2026Updated 2 weeks ago
- Graphical Representation of Ancestral Sequence Predictions☆12Mar 6, 2023Updated 2 years ago
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- ☆136Aug 8, 2024Updated last year
- Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!☆26Jul 28, 2022Updated 3 years ago
- Reference genome quality scores☆20Dec 17, 2020Updated 5 years ago
- metagenome population recombination rate estimation pipeline☆12Nov 23, 2025Updated 3 months ago
- interactive visualization of single-cell transcriptomes☆11Dec 23, 2023Updated 2 years ago
- https://molecular-neurogenetics.github.io/truster/☆11Jul 14, 2025Updated 7 months ago