☆31May 29, 2014Updated 11 years ago
Alternatives and similar repositories for compgenr
Users that are interested in compgenr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Feb 23, 2026Updated last month
- Unix-based RNA-seq quantification pipeline☆10Nov 18, 2015Updated 10 years ago
- ☆16May 10, 2022Updated 3 years ago
- Analysis for svaseq paper☆20Aug 20, 2014Updated 11 years ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Sep 5, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Jul 5, 2023Updated 2 years ago
- Gene orthologs for model organisms in a tidy data format☆14Sep 29, 2022Updated 3 years ago
- Easy Copy Number !☆21Aug 27, 2025Updated 7 months ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆20Mar 28, 2026Updated 2 weeks ago
- mutSignatures R package - updated (dev) version - 2.1.4☆14Jan 18, 2023Updated 3 years ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆27Oct 29, 2019Updated 6 years ago
- A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methyl…☆49Oct 10, 2023Updated 2 years ago
- ☆11Apr 25, 2024Updated last year
- Calculates the Variant Allele Fraction of variants in VCF files☆19Nov 28, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- R package for genomic feature analysis and visualization☆79Apr 15, 2025Updated 11 months ago
- Nanopore SimulatION is a tool for simulating an Oxfornd Nanopore Technologies MinION device for bioinformatic development.☆19Nov 30, 2017Updated 8 years ago
- Repo for a Microbiome Protocol☆10Apr 26, 2018Updated 7 years ago
- Write PubMed search results with two display options (citation or listview) to PDF or Word☆13Oct 18, 2020Updated 5 years ago
- The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Se…☆21Updated this week
- Workshop materials for SFSU SCIP 2022.☆16Jun 6, 2022Updated 3 years ago
- Upgrade to coloc☆13Aug 1, 2018Updated 7 years ago
- ☆15Feb 7, 2020Updated 6 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Jan 25, 2022Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- microbial bioinformation☆13May 14, 2020Updated 5 years ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆22Nov 16, 2020Updated 5 years ago
- R Package 📦 of useful helper functions☆14Mar 6, 2024Updated 2 years ago
- software package for integrative genetic association analysis☆36Jul 8, 2023Updated 2 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Oct 14, 2025Updated 6 months ago
- Tools for working with WGBS data☆14Jul 3, 2017Updated 8 years ago
- sake☆29Feb 8, 2023Updated 3 years ago
- Work supporting the comparison of SnpEff and VEP effect prediction and HGVS identifiers☆11Mar 15, 2017Updated 9 years ago
- A single package (command line tool and library) in Java to validate, simulate, translate and analyse NeuroML 2 models☆12Feb 12, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Sep 20, 2019Updated 6 years ago
- R package to easily generate "V-plots" of paired-end sequencing data over regions of interest☆11Dec 1, 2023Updated 2 years ago
- Super high performance interactive heatmap software☆32Nov 19, 2018Updated 7 years ago
- SRA python tools☆11Jun 9, 2021Updated 4 years ago
- Code for TAD_SV project☆11Mar 16, 2022Updated 4 years ago
- ☆18Jan 30, 2023Updated 3 years ago
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆10May 12, 2025Updated 11 months ago