☆15Oct 28, 2020Updated 5 years ago
Alternatives and similar repositories for bert-fold
Users that are interested in bert-fold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆21Jul 16, 2020Updated 5 years ago
- Singularity recipe for AlphaFold☆37Nov 12, 2024Updated last year
- Demo of diffusion models #DDPM applied to molecular dynamics of small peptide☆14Jan 26, 2024Updated 2 years ago
- TABR-BERT: an Accurate and Robust BERT-based Transfer Learning Model for TCR-pMHC Interaction Prediction☆12Jul 19, 2024Updated last year
- ☆15Nov 13, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.☆20Sep 16, 2024Updated last year
- Signaling Pathway Visualizer☆10Jun 22, 2019Updated 6 years ago
- ☆18Nov 18, 2025Updated 7 months ago
- ☆15Apr 26, 2025Updated last year
- Web application for Rxivist, the site that makes it easier to find the most talked-about papers on bioRxiv.org☆10Mar 1, 2023Updated 3 years ago
- A package for making MuE observation models in Edward2.☆13Jun 10, 2021Updated 5 years ago
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆28Apr 22, 2025Updated last year
- MaveDB database web application☆13Nov 17, 2023Updated 2 years ago
- (Idea stage) Open-source platform for virtual&hybrid conferencing☆13Jul 3, 2020Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆12Jun 26, 2020Updated 5 years ago
- ☆11Jan 3, 2024Updated 2 years ago
- Implementation of trRosetta and trDesign for Pytorch, made into a convenient package, for protein structure prediction and design☆83Aug 27, 2021Updated 4 years ago
- My thesis project☆10Jun 7, 2021Updated 5 years ago
- R2Plus1D MXNet Implementation☆11Jul 11, 2018Updated 7 years ago
- Scripts for training Qwen 2.5 VL with ms-swift and GRPO☆12Feb 27, 2025Updated last year
- Replication attempt for the Protein Folding Model described in https://www.biorxiv.org/content/10.1101/2021.08.02.454840v1☆37May 19, 2022Updated 4 years ago
- This is the Pytorch implementation of paper--Training deep neural-networks using a noise adaptation layer.☆10Apr 18, 2021Updated 5 years ago
- A curated list of resources about SOLID, the future of the Web!☆15Apr 25, 2019Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Open source code combining implementations of Upside Down Reinforcement Learning and Reward Conditioned Policies☆20Mar 10, 2021Updated 5 years ago
- A sequence-based pan model for peptide-MHC I binding affinity prediction.☆26Apr 25, 2019Updated 7 years ago
- Python tool to run docker containers in sequence, for reproducible computational analysis pipelines☆11Oct 23, 2015Updated 10 years ago
- Genetic Algorithm for integer constrained optimization and its applications☆11Oct 5, 2023Updated 2 years ago
- Graph Learning of INTER-protein contacts☆10Feb 20, 2022Updated 4 years ago
- Code for running BinderFlow☆66Nov 21, 2025Updated 6 months ago
- Variational Autoencoder (VAE)-like neural network to solve ideal MHD equilibrium in a tokamak☆11May 20, 2022Updated 4 years ago
- ☆40Aug 31, 2021Updated 4 years ago
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Aug 5, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The code enables to perform Bayesian inference in an efficient manner through the use of Hamiltonian Neural Networks (HNNs), Deep Neural …☆17Jan 14, 2023Updated 3 years ago
- Extract ligand binding sites from PDB. Match the binding sites to de novo scaffolds.☆12Dec 29, 2020Updated 5 years ago
- Code for "T Cell Receptor Specificity Prediction with Bimodal Attention Networks" (https://doi.org/10.1093/bioinformatics/btab294, ISMB 2…☆31Jul 12, 2025Updated 11 months ago
- What do CLIP Vision Transformers learn? Feature Visualization can show you!☆15Aug 29, 2024Updated last year
- A plugin from ECMWF/ai-models, with models sourced from PuYun Meteorological Model in Metacarbon (Hangzhou)☆21Sep 30, 2025Updated 8 months ago
- A Python multigrid solver implementation for education.☆20May 11, 2015Updated 11 years ago
- Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.☆60Mar 24, 2021Updated 5 years ago