akirasosa / bert-foldView external linksLinks
☆15Oct 28, 2020Updated 5 years ago
Alternatives and similar repositories for bert-fold
Users that are interested in bert-fold are comparing it to the libraries listed below
Sorting:
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Aug 5, 2021Updated 4 years ago
- ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.☆20Sep 16, 2024Updated last year
- Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.☆60Mar 24, 2021Updated 4 years ago
- Replication attempt for the Protein Folding Model described in https://www.biorxiv.org/content/10.1101/2021.08.02.454840v1☆37May 19, 2022Updated 3 years ago
- This module includes functions that can be used to simulate mechanochemical phenomena.☆11Nov 16, 2021Updated 4 years ago
- Singularity recipe for AlphaFold☆36Nov 12, 2024Updated last year
- All things manipulating, quantifying, and visualizing geochemical data☆12Jan 19, 2024Updated 2 years ago
- Implementation of trRosetta and trDesign for Pytorch, made into a convenient package, for protein structure prediction and design☆83Aug 27, 2021Updated 4 years ago
- Genetic Algorithm for integer constrained optimization and its applications☆10Oct 5, 2023Updated 2 years ago
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆36May 30, 2021Updated 4 years ago
- Detect interesting SARS-CoV-2 spike protein variants from Sanger sequencing data.☆11Apr 15, 2022Updated 3 years ago
- ☆12Jun 26, 2020Updated 5 years ago
- Sequential Parameter Optimization in Python☆14Jan 12, 2026Updated last month
- course material for the "Notebooks to Scripts to Packages" workshop as part of Princeton Wintersession 2023☆15Jan 17, 2024Updated 2 years ago
- ☆10Apr 30, 2025Updated 9 months ago
- Fragment Graphical Variational AutoEncoding for Screening and Generating Molecules☆14Nov 21, 2022Updated 3 years ago
- Compressing protein structures effectively with torsion angles☆186Updated this week
- ☆11Jan 5, 2022Updated 4 years ago
- The quantum circuit version of support vector machine to recognize handwritten 6 and 9☆11Aug 29, 2017Updated 8 years ago
- Peptide Correlation analysis☆11Oct 3, 2024Updated last year
- [ICLR 2026] Optimization-free Dataset Distillation for Object Detection. Paper at: https://arxiv.org/abs/2506.01942☆22Jan 26, 2026Updated 2 weeks ago
- The Expanded Package for IET Solvation☆13Feb 6, 2025Updated last year
- Contact-based protein structure prediction☆10Feb 12, 2019Updated 7 years ago
- Resources for Drug Repurposing In Alzheimer's Disease (DRIAD) work☆11Mar 4, 2021Updated 4 years ago
- PASTASpark is an extension to PASTA (Practical Alignments using SATé and TrAnsitivity) that allows to execute it on a distributed memory …☆10Mar 19, 2019Updated 6 years ago
- DEPRECATED! This project has moved to mbed-os☆11Jan 10, 2017Updated 9 years ago
- Drug Release Analysis Framework☆25Updated this week
- ☆15Apr 26, 2025Updated 9 months ago
- Unsupervised fingerprinting of disordered solids leading to analogical materials discovery.☆10Feb 14, 2023Updated 3 years ago
- Experiments in protein folding through language modeling☆10Dec 10, 2021Updated 4 years ago
- GStreamer plugin for Cedar hardware encoding☆16Jul 26, 2014Updated 11 years ago
- GPT-based protein language model for PTM site prediction☆19Aug 11, 2024Updated last year
- 🔍 Fit3D - An application for template-based detection of small structural motifs in protein structures and macromolecular structure data…☆11Oct 16, 2018Updated 7 years ago
- Implementation of MOFF force field. Please cite us at Latham, A; Zhang, B J. Chem. Theory Comput. 2021, 17, 3134. (https://pubs.acs.org/d…☆10Jun 16, 2022Updated 3 years ago
- Libva backend for the sunxi-cedrus v4l2 m2m driver. Upstream moved to https://github.com/free-electrons/cedrus☆10Aug 29, 2016Updated 9 years ago
- Supporting codes for the numerical implementations in the paper "Operator inference for non-intrusive model reduction with quadratic mani…☆11Aug 18, 2022Updated 3 years ago
- libhadoop is a pure c/c++ liberary for hadoop hdfs like libhdfs☆19Aug 6, 2012Updated 13 years ago
- A set a basic Python scripts to edit a multiple sequence alignment and generate a protein consensus sequence☆18Jun 9, 2022Updated 3 years ago
- The official code for "Advancing Multimodal Large Language Models with Quantization-Aware Scale Learning for Efficient Adaptation" | [MM2…☆14Dec 7, 2024Updated last year