Zehui127 / Latent-DNA-Diffusion
Latent Diffusion Model for DNA Sequence Generation
☆20Updated 3 weeks ago
Related projects ⓘ
Alternatives and complementary repositories for Latent-DNA-Diffusion
- ☆30Updated last year
- ☆40Updated 3 years ago
- Primary RNA sequence model☆29Updated 6 months ago
- Contextual AI models for single-cell protein biology☆72Updated last month
- ☆72Updated last month
- ☆21Updated 3 weeks ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆87Updated 2 months ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆157Updated 8 months ago
- The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)☆34Updated last year
- Repository for mRNA Paper and CodonBERT publication.☆113Updated 5 months ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆20Updated 2 weeks ago
- ☆51Updated 2 months ago
- ☆46Updated 10 months ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆28Updated 7 months ago
- ☆32Updated last year
- RiboNucleic Acid (RNA) Language Model☆72Updated last week
- Interpretation by Deep Generative Masking for Biological Sequences☆36Updated 2 years ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆55Updated last year
- A deep generative neural network based approach to impute drug response☆18Updated 3 years ago
- TEIM: TCR-Epitope Interaction Modeling☆43Updated last year
- ☆26Updated 9 months ago
- Computational Optimization of DNA Activity (CODA)☆39Updated 2 months ago
- Code for evaluating single cell foundation models scBERT and scGPT☆30Updated 2 months ago
- ☆77Updated last year
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆17Updated 2 weeks ago
- DeepTTC: a transformer-based model for predicting cancer drug response☆15Updated last year
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆68Updated 7 months ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆23Updated 2 weeks ago
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆56Updated 4 months ago
- Geometric deep learning of protein–DNA binding specificity☆49Updated last month