A modernized ART for Illumina, MGI Tech & More read simulation.
☆34Jul 31, 2026Updated last week
Alternatives and similar repositories for art_modern
Users that are interested in art_modern are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Simulating paired-end short sequencing reads from circular and linear genomes☆17May 14, 2021Updated 5 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Dec 13, 2024Updated last year
- Robust individual and aggregate checksums for nucleotide sequences☆18Mar 3, 2026Updated 5 months ago
- ☆21Feb 15, 2025Updated last year
- ☆10Jun 9, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- MEMO: MEM-based pangenome indexing for k-mer queries☆20Jun 11, 2024Updated 2 years ago
- Emending Alignment of Spliced Transcript Reads☆12Jan 19, 2026Updated 6 months ago
- Fast pairwise transmission inference from single genome and/or metagenomic data☆37Updated this week
- Extracting paths from assembly graphs☆24Jun 22, 2026Updated last month
- Alignment-free pangenome browser and analysis toolkit☆84May 18, 2026Updated 2 months ago
- Summarize and filter read alignments from multiple sequencing samples (taken as sorted BAM files)☆18Oct 12, 2025Updated 9 months ago
- ☆22Jul 25, 2026Updated 2 weeks ago
- Ultra-efficient and sensitive method to search for Open Reading Frames in spliced genomes guided by reference annotation to maximize prot…☆44Mar 21, 2026Updated 4 months ago
- snakemake-powered cli to download genomes using NCBI datasets☆15Aug 14, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Converts 'MultiQC' Reports into Tidy Data Frames☆19Apr 1, 2024Updated 2 years ago
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆21Nov 2, 2024Updated last year
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆63May 17, 2026Updated 2 months ago
- A fully featured MinKNOW simulator for testing read until experiments.☆25Apr 28, 2025Updated last year
- A SIMD-accelerated library to compute random minimizers☆46Jul 7, 2026Updated last month
- Fast and Memory Efficient Genome Sketching via HyperLogLog, HyperMinHash, UltraLogLog and ExaLogLog☆22Jul 29, 2026Updated last week
- High-performance UMI tools for NGS data analysis☆49Updated this week
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆44Dec 18, 2025Updated 7 months ago
- misFinder: Identify mis-assemblies in an unbiased manner using reference and paired-end reads☆10Oct 17, 2015Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Software used by Trinity CTAT for building CTAT Genome Libs, resource databases shared by Trinity CTAT components☆12Apr 28, 2025Updated last year
- Tool for exploring sequence alignment algorithms☆14Aug 30, 2024Updated last year
- A tool easily taken advantage of for in silico serogrouping of Pseudomonas aeruginosa isolates☆15Aug 26, 2024Updated last year
- ☆24Nov 19, 2025Updated 8 months ago
- Successor of bwa-mem for short-read alignment☆319Updated this week
- ☆24Jun 7, 2024Updated 2 years ago
- TD2☆41May 17, 2026Updated 2 months ago
- akutils with massive updates over v1.1 to functionality and command line interface.☆15Jun 25, 2019Updated 7 years ago
- Compute bottom-s sketches and s-buckets sketches, using simd-minimizers crate.☆21May 31, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Ley Lab MetaGenome Profiler DataBase generator☆48Nov 9, 2022Updated 3 years ago
- ☆15May 22, 2026Updated 2 months ago
- Evolution-inspired data augmentations for PyTorch-based models for regulatory genomics☆25Jun 3, 2025Updated last year
- Taxonomic classifier for sequencing reads (bulk and single-cell data, short and long read) using FM-index with run-block compressed BWT.☆95Updated this week
- Better and faster Rust implementation of the FragGeneScan gene prediction model for short and error-prone reads.☆31Feb 3, 2026Updated 6 months ago
- ☆27Oct 22, 2025Updated 9 months ago
- KmerCamel🐫 provides implementations of several algorithms for efficiently representing a set of k-mers as a masked superstring.☆20Jul 24, 2026Updated 2 weeks ago