josiehong / 3DMolMSLinks
[Bioinformatics] 3DMolMS: prediction of tandem mass spectra from 3D molecular conformations
☆23Updated 3 months ago
Alternatives and similar repositories for 3DMolMS
Users that are interested in 3DMolMS are comparing it to the libraries listed below
Sorting:
- Efficiently predicting high resolution mass spectra with graph neural networks☆32Updated 2 years ago
- Predicting molecular fingerprint from electron−ionization mass spectrum with deep neural networks☆36Updated last year
- ☆29Updated last year
- Awesome papers and codes list of small molecule mass spectrometry-related machine learning methods☆35Updated last week
- Encoding MS/MS spectra using formula transformers for inferring molecular properties☆72Updated last year
- ☆33Updated last year
- Predicting MS1 precursor chemical formula from MS/MS data☆23Updated 2 years ago
- ☆11Updated 3 years ago
- ☆12Updated this week
- A python client for the ClassyFire API☆17Updated 5 years ago
- Publicly-accessible repo for ACS paper "Rapid Approximate Subset-Based Spectra Prediction for Electron Ionization−Mass Spectrometry" (RAS…☆25Updated 3 years ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆71Updated last month
- Predicting tandem mass spectra from molecules☆127Updated last week
- ☆72Updated last year
- Tandem Mass Spectrum Prediction with Graph Transformers☆98Updated last year
- Meet FIORA! An in silico fragmentation algorithm designed to predict tandem mass spectra (MS/MS) with high accuracy. Using graph neural n…☆47Updated 3 months ago
- Prediction of metabolites formed by phase I and phase II xenobiotic metabolism.☆16Updated 3 years ago
- MassSpecGym: A benchmark for the discovery and identification of molecules (NeurIPS 2024 Spotlight)☆109Updated 2 months ago
- ☆28Updated 2 years ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆59Updated last month
- The dataset, code, and software for the paper 'Retention Time Prediction for Chromatographic Enantioseparation by Quantile Geometry-enhan…☆19Updated 2 years ago
- Official github for "Drug-likeness scoring based on unsupervised learning" (Chemical Science)☆24Updated 4 months ago
- Smash molecule and obtain significant fragments☆20Updated 4 years ago
- Python tool for generate fingerprints of a molecule☆85Updated 7 months ago
- ☆22Updated 4 months ago
- Curated list on Deep Transformers Applications on Biology and Chemistry☆18Updated 2 years ago
- A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data☆26Updated 2 years ago
- ☆17Updated 2 months ago
- Synthetic Accessible Prediction of Organic Compounds based on Graph Attention Mechanism☆22Updated 2 years ago
- Protein target prediction using random forests and reliability-density neighbourhood analysis☆41Updated 5 years ago