Alternatives and similar repositories for NeuroSEED:

Users that are interested in NeuroSEED are comparing it to the libraries listed below

• MachineLearningLifeScience / meaningful-protein-representations
  ☆108Updated 2 years ago
• OpenBioML / protein-lm-scaling
  ☆57Updated 10 months ago
• snap-stanford / multiscale-interactome
  ☆65Updated last year
• lightonai / RITA
  RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma…
  ☆96Updated 2 years ago
• HannesStark / protein-localization
  Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…
  ☆59Updated last year
• mims-harvard / PDGrapher
  Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks
  ☆23Updated last month
• wangshenguiuc / set2gaussian
  code repo for Set2Gaussian
  ☆15Updated 4 years ago
• ml4bio / e2efold
  pytorch implementation for "RNA Secondary Structure Prediction By Learning Unrolled Algorithms"
  ☆109Updated 9 months ago
• THUDM / ProteinLM
  Protein Language Model
  ☆115Updated last year
• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆37Updated 3 years ago
• PaccMann / paccmann_proteomics
  PaccMann models for protein language modeling
  ☆41Updated 3 years ago
• alrojo / UniLanguage
  Homology reduced UniProt, train-/valid-/testsets for language modeling
  ☆16Updated 2 years ago
• BorgwardtLab / proteinshake
  Protein structure datasets for machine learning.
  ☆104Updated 6 months ago
• tbepler / prose
  Multi-task and masked language model-based protein sequence embedding models.
  ☆99Updated 3 years ago
• BoHuangLab / Protein-Localization-Transformer
  Code for CELL-E: Biological Zero-Shot Text-to-Image Synthesis for Protein Localization Prediction
  ☆28Updated last year
• HarveyYan / RNAonGraph
  A repository for neural representational learning of RNA secondary structures
  ☆31Updated 4 years ago
• ml-jku / DeepRC
  DeepRC: Immune repertoire classification with attention-based deep massive multiple instance learning
  ☆116Updated last year
• Sanofi-Public / CodonBERT
  Repository for mRNA Paper and CodonBERT publication.
  ☆118Updated 7 months ago
• lbcb-sci / RiNALMo
  RiboNucleic Acid (RNA) Language Model
  ☆80Updated 2 months ago
• Genentech / iterative-perturb-seq
  Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors
  ☆36Updated 8 months ago
• lucidrains / tf-bind-transformer
  A repository with exploration into using transformers to predict DNA ↔ transcription factor binding
  ☆82Updated 2 years ago
• prescient-design / lobster
  Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation
  ☆64Updated this week
• rmrao / msa-transformer
  MSA Transformer reproduction code
  ☆72Updated 3 years ago
• amirmohan / epistatic-net
  Epistatic Net is an algorithm which allows for spectral regularization of deep neural networks to predict biological fitness functions (e…
  ☆17Updated 3 years ago
• DeepGraphLearning / PEER_Benchmark
  PEER Benchmark, appear at NeurIPS 2022 Dataset and Benchmark Track (https://arxiv.org/abs/2206.02096)
  ☆84Updated last year
• stamakro / GCN-for-Structure-and-Function
  Code for reproducing results of "Unsupervised embeddings is all you need for protein function prediction"
  ☆39Updated last year
• kexinhuang12345 / ml-genomics-resources
  Machine Learning for Genomics and Therapeutics Resources (Cell Patterns)
  ☆76Updated 3 years ago
• aedera / anc2vec
  Unsupervised neural network for learning embeddings of GO terms.
  ☆16Updated 2 years ago
• RECOVERcoalition / Recover
  Exploring the space of drug combinations to discover synergistic drugs using Active Learning
  ☆23Updated 5 months ago
• HanwenXuTHU / BioTranslatorProject
  ☆33Updated last year