VertebrateResequencing / wrLinks
High performance Workflow Runner
☆30Updated this week
Alternatives and similar repositories for wr
Users that are interested in wr are comparing it to the libraries listed below
Sorting:
- biogo high throughput sequencing repository☆126Updated last year
- Funnel is a toolkit for distributed task execution via a simple, standard API.☆129Updated this week
- Bioinformatic infrastructure libraries☆78Updated 4 years ago
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Updated 5 years ago
- goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary☆221Updated 9 months ago
- workflow and resource management system for bioinformatics data analysis☆69Updated 4 years ago
- A lightweight and high-performance bioinformatics package in Golang☆93Updated 10 months ago
- A collection of genomics software tools written in Go (golang).☆84Updated this week
- CWL (and input file) parser for Golang, used by github.com/otiai10/yacle☆22Updated 6 years ago
- Lollipop-style mutation diagrams for annotating genetic variations.☆191Updated 9 months ago
- Build and Deliver Software with Containers☆32Updated 4 years ago
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆98Updated 2 years ago
- a golang library to read, write and manipulate files in the variant call format.☆70Updated 9 months ago
- Server wrapper that turns command line tools into web services☆61Updated 6 years ago
- A fast Python library for VCF files leveraging Cython for speed.☆52Updated 7 years ago
- SQL-like query language for the SAM/BAM file format☆29Updated last year
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0☆74Updated 4 years ago
- Web client for CIViC: Clinical Interpretations of Variants in Cancer☆50Updated last year
- Interval data structure☆233Updated 7 months ago
- Suite of tools for use in genome assembly and consensus. Work in progress.☆31Updated 4 years ago
- Go / Golang Bioinformatics Library☆45Updated 9 months ago
- C++ Library to parse Illumina InterOp files☆78Updated last month
- The Ensembl Core Perl API and SQL schema☆81Updated this week
- ☆82Updated 6 years ago
- Standalone C library for assembling Illumina short reads in small regions☆72Updated 2 years ago
- Accurate metagenomic profiling && Fast large-scale sequence/genome searching☆193Updated last year
- Language and framework for high performance computational pipelines.☆154Updated 3 weeks ago
- utilities for indexing and sequence extraction from FASTA files☆59Updated 4 years ago
- example applications built using bíogo☆18Updated 4 years ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆98Updated 7 years ago