Alternatives and similar repositories for Cardinal3-vignettes

Users that are interested in Cardinal3-vignettes are comparing it to the libraries listed below

• kuwisdelu / Cardinal
  Mass spectrometry imaging toolbox
  ☆69Updated 3 months ago
• UCLouvain-CBIO / scp
  Single cell proteomics data processing
  ☆30Updated 3 months ago
• PennHui2016 / OpDEA
  A toolkit for optimal workflow recommendation for proteomics data differential expression analysis
  ☆19Updated last year
• marcovito / sma
  ☆15Updated 2 years ago
• showteeth / GEfetch2R
  GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools
  ☆39Updated last week
• liuhong-jia / scAnno
  ☆27Updated 8 months ago
• QuKunLab / COVID-19
  The R/Python scripts for the analysis of single-cell RNA-seq data from COVID-19 patients
  ☆10Updated 5 years ago
• broadinstitute / single_cell_classification
  Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles
  ☆30Updated 5 years ago
• aifimmunology / aifi-healthy-pbmc-reference
  Assembly and Annotation of the Human Immune Health Atlas
  ☆20Updated 5 months ago
• Core-Bioinformatics / ClustAssess
  Tools for assessing clustering robustness
  ☆31Updated last week
• SydneyBioX / scFeatures
  ☆14Updated 2 weeks ago
• RCHENLAB / scGPT_fineTune_protocol
  ☆18Updated 6 months ago
• pachterlab / GFCP_2022
  RNA velocity validation
  ☆22Updated 3 years ago
• PFPrzytycki / CellWalkR
  CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements
  ☆22Updated 4 months ago
• dbdimitrov / BingleSeq
  BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses
  ☆22Updated 4 years ago
• shahcompbio / spectrum-tme
  Supporting material for publication: "Ovarian cancer mutational processes drive site-specific immune evasion"
  ☆24Updated 9 months ago
• yuanzhiyuan / SODB_analysis
  ☆12Updated 2 years ago
• DavisLaboratory / vissE
  An R/Bioconductor package to identify higher-order molecular phenotypes
  ☆19Updated 2 years ago
• reactome / ReactomeGSA
  R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis
  ☆32Updated last week
• Center-for-Health-Data-Science / multiDGD
  ☆27Updated 8 months ago
• wwylab / DeMixT
  ☆38Updated 4 months ago
• jiang-junyao / CACIMAR
  cross-species analysis of cell identities, markers and regulations
  ☆12Updated 6 months ago
• pnnl / leapR
  ☆18Updated 2 weeks ago
• netbiolab / scHumanNet
  Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3
  ☆45Updated 5 months ago
• data2intelligence / CytoSig_prediction
  Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts
  ☆14Updated 2 years ago
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆65Updated last month
• LukszaLab / NeoantigenEditing
  ☆23Updated 3 years ago
• olapuentesantana / easier
  R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq
  ☆15Updated 2 months ago
• kris-nader / scTherapy
  Identification of clone-specific and cancer-selective multi-targeting therapeutic options based on single-cell transcriptomic profiles of…
  ☆19Updated 11 months ago
• jeffsocal / tidyproteomics
  An S3 data object and framework for common quantitative proteomic analyses
  ☆47Updated last month