A deep learning framework for essential gene prediction
☆12Aug 17, 2020Updated 5 years ago
Alternatives and similar repositories for DeepHE
Users that are interested in DeepHE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a deep learning framework for essential protein prediction☆13Mar 24, 2023Updated 3 years ago
- Open source LAB DF3 clone, but with a face insert.☆22Jul 31, 2025Updated 7 months ago
- The code and analyses accompanying the manuscript “MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data”.☆12Nov 28, 2018Updated 7 years ago
- Deep neural network based prediction model for gene essentiality prediction in microbes☆10Feb 11, 2021Updated 5 years ago
- MicroPheno Project☆12Oct 21, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).☆15May 9, 2019Updated 6 years ago
- ☆16Nov 11, 2022Updated 3 years ago
- ☆13Apr 18, 2022Updated 3 years ago
- Command Line Interface (CLI) to export METS/ALTO documents to other formats.☆13Apr 25, 2022Updated 3 years ago
- ☆15Dec 18, 2024Updated last year
- ☆17May 23, 2025Updated 10 months ago
- Full-length protein structure determination from cryo-EM maps using deep learning☆15May 28, 2023Updated 2 years ago
- A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests and viral simulations at scale. Related manuscr…☆15Mar 14, 2026Updated last week
- ☆15Jul 21, 2025Updated 8 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ProtGraph - A Graph-Generator for Proteins☆13Mar 4, 2026Updated 3 weeks ago
- repDNA is a Python package to generate various features of DNA sequences incorporating physicochemical properties and sequence-order effe…☆13Jul 16, 2022Updated 3 years ago
- Effect of tokenization on transformers for biological sequence☆22Dec 31, 2025Updated 2 months ago
- ☆12Jan 8, 2026Updated 2 months ago
- 一个简单的reactor 网络模型实例代码☆12Jun 17, 2019Updated 6 years ago
- ☆27Oct 29, 2021Updated 4 years ago
- neuropeptide prediction☆13Sep 2, 2022Updated 3 years ago
- ☆18Nov 3, 2025Updated 4 months ago
- Accurate and fast taxonomic classification using pseudoaligning☆21Sep 16, 2017Updated 8 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Multi-Teacher Distillation for Protein embedding☆12May 31, 2024Updated last year
- Many algorithms for imbalanced data support binary and multiclass classification only. This approach is made for mulit-label classificati…☆14Jun 2, 2024Updated last year
- Starter code for working with the YouTube-8M dataset.☆16Jun 9, 2017Updated 8 years ago
- FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.…☆12May 8, 2025Updated 10 months ago
- Benchmarking compound activity prediction for real-world drug discovery applications☆14May 7, 2024Updated last year
- Strain Prediction and Analysis with Representative SEquence☆19Dec 8, 2024Updated last year
- H3ABioNet 16S rDNA diverstity analysis package☆19May 20, 2019Updated 6 years ago
- An accurate and universal protein-small molecule batch docking solution using Autodock Vina☆16Nov 20, 2024Updated last year
- tumor - cancer cell line alignment. Use it on the depmap portal or install it with pip.☆11Dec 5, 2023Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A Reproducible Untargeted Metabolomics Data Processing Pipeline☆11Mar 18, 2021Updated 5 years ago
- Gene Family Annotation Workflow☆11Mar 26, 2024Updated 2 years ago
- ☆46Nov 17, 2025Updated 4 months ago
- Conversion of PDBx/mmCIF files to best effort/minimal PDB files☆23Nov 1, 2024Updated last year
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆19Feb 6, 2023Updated 3 years ago
- Google AI 2018 BERT pytorch implementation☆13Oct 22, 2018Updated 7 years ago
- wrapper functions to use ggstatsplot functions as a module in jamovi☆11Mar 8, 2026Updated 2 weeks ago