A dissipative particle dynamics (DPD) project.
☆13Aug 16, 2023Updated 2 years ago
Alternatives and similar repositories for DPDsim
Users that are interested in DPDsim are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Source code for "Nucleosome plasticity is a critical element of chromatin liquid–liquid phase separation and multivalent nucleosome inter…☆13Jun 17, 2022Updated 4 years ago
- ☆13Dec 17, 2025Updated 6 months ago
- Xlink is a Python script that uses Gromacs to automatically perfom simulation crosslinking and generate atomistic model of aromatic polya…☆17Jul 8, 2023Updated 2 years ago
- A Finite Element Approximation of a Cahn--Hilliard Tumour Model with FEniCS, by Dennis Trautwein (2020).☆10Oct 11, 2020Updated 5 years ago
- A Program for Molecular Structure and Topology Generation of Polymer-Grafted Hybrid Nanostructures☆12Jun 17, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Flexible Library of Organic Workflows and Extensible Recipes for Molecular Dynamics.☆22Jun 22, 2026Updated last week
- ☆26Feb 13, 2025Updated last year
- Library of Python classes for parsing LAMMPS density profiles and data files, and specifically for post-processing of MD simulations of p…☆13Feb 26, 2024Updated 2 years ago
- SMolSAT.py: Soft-Matter Molecular Simulation Analysis Toolkit☆15Dec 17, 2024Updated last year
- A molecular dynamics tutorial for new researchers in the area of nanomechanics.☆16Sep 2, 2022Updated 3 years ago
- ☆10Jun 9, 2026Updated 3 weeks ago
- ☆17Oct 29, 2025Updated 8 months ago
- A package of tools for automating the file preparation for the LAMMPS fix bond/react.☆23Sep 27, 2022Updated 3 years ago
- Coarse-grained mapping and parametrisation for the Martini 3 forcefield☆23May 27, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- RadonPy is a Python library to automate physical property calculations for polymer informatics.☆268Jun 28, 2026Updated last week
- LigParGen python package version 2.3 (beta)☆14Apr 19, 2025Updated last year
- ☆14Oct 2, 2024Updated last year
- Automatic generation of LAMMPS data file for atomistic and coarse-grained simulations of molecular and polymeric materials with various t…☆25Mar 24, 2026Updated 3 months ago
- A generic and fast solver of mode-coupling theory-like integrodifferential equations☆21Oct 10, 2025Updated 8 months ago
- The Free Energy and Advanced Sampling Simulation Toolkit (FEASST) is a free and open-source software to conduct molecular- and particle-b…☆44Jun 25, 2026Updated last week
- Swarm-CG: Automatic Parametrization of Bonded Terms in MARTINI-based Coarse-Grained Models of Simple to Complex Molecules via Fuzzy Self-…☆49Aug 19, 2024Updated last year
- Gromacs to Lammps simulation converter☆94Dec 9, 2023Updated 2 years ago
- Provides some useful information and the LAMMPS input files to model a polymer-metal interface.☆40Nov 11, 2021Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A Python library for constructing polymer topologies and coordinates☆22Sep 23, 2025Updated 9 months ago
- A software tool based on Monte Carlo methods, ZENO computes material properties at nanoscale.☆21Apr 28, 2026Updated 2 months ago
- Shared repo for trajectory analysis and infrastructure development☆24Feb 21, 2024Updated 2 years ago
- Perform polymerization and crosslinking in MARTINI coarse-grained forcefield using GROMACS MD package☆30Jan 21, 2026Updated 5 months ago
- Generate coarse-grained molecular dynamics models from atomistic trajectories.☆67Nov 26, 2025Updated 7 months ago
- PSP is a python toolkit for predicting atomic-level structural models for a range of polymer geometries.☆50Jul 5, 2024Updated last year
- Python bindings for TNG file format☆13Oct 14, 2025Updated 8 months ago
- Calculates 3d structure factor and simulated x-ray diffraction pattern from molecular dynamics trajectories☆19Nov 21, 2019Updated 6 years ago
- Polymer self-consistent field theory (Fortran version)☆17Jul 25, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Code for MAE 423 Heat Transfer (Fall 2019-20).☆16Jan 15, 2020Updated 6 years ago
- Example of using JupyterHub with JupyterLab RTC☆11Dec 17, 2021Updated 4 years ago
- Rheological Universal Differential Equations: scientific machine learning for modeling complex fluids☆21Dec 23, 2022Updated 3 years ago
- Automatic MARTINI parametrization of small organic molecules☆76May 28, 2025Updated last year
- python code to calculate inelastic-neutron-scattering dynamic structure factor, S(Q,w), from molecular dynamics trajectories using parall…☆22May 7, 2026Updated last month
- a tool for creating Molecular Dynamics-ready models of polymeric systems☆24Feb 25, 2019Updated 7 years ago
- Convert files from the ATB repository to LAMMPS format☆22Aug 26, 2025Updated 10 months ago