Tool to predict (bio)chemical reactions using graph mining.
☆23Nov 29, 2017Updated 8 years ago
Alternatives and similar repositories for ReactionMiner
Users that are interested in ReactionMiner are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Exercises for training scientists to perform some RNA-seq analyses.☆11Oct 7, 2019Updated 6 years ago
- ☆27Mar 31, 2023Updated 3 years ago
- Telomerecat: The telomere computational analysis tool☆14Oct 9, 2020Updated 5 years ago
- Documentation on EPAM Life Sciences open source solutions☆18Jul 15, 2026Updated 3 weeks ago
- Dugong - Scientific Linux Container☆17Jul 25, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Annotation of in source LC/MS data☆13Oct 19, 2024Updated last year
- Biosynthesis Navigator for Natural Products☆57Jul 4, 2022Updated 4 years ago
- Software for error-tolerant coding of information into DNA sequences using finite-state transducers.☆12Jan 8, 2017Updated 9 years ago
- a Graph database and R package for omic data integration☆19Oct 28, 2016Updated 9 years ago
- method to estimate PCR duplication rate from high-throughput sequencing data☆15Sep 22, 2017Updated 8 years ago
- ☆20May 25, 2020Updated 6 years ago
- ☆31Nov 28, 2024Updated last year
- Repo hosting the MetFrag website☆11Apr 6, 2026Updated 4 months ago
- FingerPrint Kit - Python-based cheminformatics package for fingerprint-related tasks☆12Jun 4, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Tutorial for Graph Neural Network at APBJC 2024.☆11Apr 21, 2025Updated last year
- A database of In-Silico predicted MS/MS spectrum of Natural Products☆15Sep 24, 2022Updated 3 years ago
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆25Jun 16, 2026Updated last month
- The official implementation for "SANGO".☆11Mar 17, 2024Updated 2 years ago
- ☆12Oct 9, 2024Updated last year
- A tool for researchers working in synthetic biology and virology to design robotic wet lab protocols using a visual UI without coding.☆32Jul 28, 2018Updated 8 years ago
- A Python wrapper for the Chemistry Development Kit (CDK)☆38Sep 9, 2025Updated 11 months ago
- The BioPAX Object Model, API and utilities implemented in Java☆28Jul 4, 2024Updated 2 years ago
- SymPy based framework for optimized code generation for BSSN formulation of Einstein equation for heterogeneous platforms.☆11Jul 27, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Nov 11, 2023Updated 2 years ago
- ☆24Dec 19, 2016Updated 9 years ago
- Junction-tree variational auto-encoder for Python 3 (https://arxiv.org/abs/1802.04364)☆12Apr 7, 2021Updated 5 years ago
- eMetabolomics project: Mass Annotation based on in silico Generated Metabolites☆17Oct 30, 2022Updated 3 years ago
- PAgeRAnk-flux on Graphlet-guided network for multi-Omic data integratioN - Network Inference☆11Nov 12, 2024Updated last year
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- ☆15Oct 4, 2021Updated 4 years ago
- A list of inspirational and thought-provoking reads about women who code.☆10Nov 20, 2025Updated 8 months ago
- An automated model test system for synthetic biology models of gene expression and regulation.☆15Sep 17, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Some dockerfiles for deep learning☆19Feb 19, 2018Updated 8 years ago
- An alignment-free approach to estimating exon-inclusion ratios without a reference transcriptome☆10Jan 25, 2019Updated 7 years ago
- Relaunch of the initial MetFrag project.☆19Mar 9, 2026Updated 5 months ago
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆12Mar 3, 2017Updated 9 years ago
- Reaction Decoder Tool (RDT) - Atom Atom Mapping Tool☆86Apr 5, 2026Updated 4 months ago
- Leveraging Heterogeneous Network Embedding for Metabolic Pathway Prediction☆17Jul 8, 2021Updated 5 years ago
- Source code for the software implementation of SeGraM proposed in our ISCA 2022 paper: Senol Cali et. al., "SeGraM: A Universal Hardware …☆13Nov 3, 2022Updated 3 years ago