Alternatives and similar repositories for ReactionMiner:

Users that are interested in ReactionMiner are comparing it to the libraries listed below

• IdoSpringer / ERGO
  ERGO is a deep learing based model for predicting TCR-peptide binding.
  ☆17Updated 2 years ago
• brsynth / rp2paths
  RetroPath2.0 to pathways
  ☆16Updated last year
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆34Updated 2 years ago
• ViennaRNA / forgi
  An RNA manipulation library.
  ☆54Updated last year
• psipred / psipred
  PSIPRED Protein Secondary Structure Predictor
  ☆54Updated 3 months ago
• graik / biskit
  A Python platform for Structural Bioinformatics
  ☆56Updated last year
• openvax / pepnet
  Neural networks for amino acid sequences
  ☆20Updated 6 years ago
• sbl-sdsc / mmtf-genomics
  Methods for mapping genomic data onto 3D protein structure.
  ☆28Updated 2 years ago
• mgalardini / pdb2uniprot
  Convert PDB residues to their Uniprot equivalents
  ☆16Updated 4 years ago
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆65Updated last year
• GfellerLab / MixMHCpred
  HLA-I ligand predictor
  ☆32Updated 2 months ago
• debbiemarkslab / EVzoom
  Visually explore covariation in protein families
  ☆37Updated 5 years ago
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆82Updated last year
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆51Updated 6 months ago
• cusbg / MolArt
  MOLeculAR structure annoTator
  ☆34Updated 4 months ago
• MannLabs / structuremap_analysis
  Analysis workflow for investigating the structural context of PTMs
  ☆11Updated last year
• ElofssonLab / TOPCONS2
  Github for the TOPCONS2
  ☆16Updated 3 years ago
• Gardner-BinfLab / TISIGNER-ReactJS
  TISIGNER: Unleash the power of synthetic biology
  ☆22Updated last year
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 2 months ago
• fjossinet / RNA-Science-Toolbox
  A platform to do RNA science
  ☆27Updated 3 years ago
• andrewguy / biostructmap
  A Python package for mapping sequence aligned data onto protein structures
  ☆34Updated 3 years ago
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆68Updated last week
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆49Updated last month
• ViennaRNA / RNAsketch
  Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.
  ☆20Updated 6 years ago
• amirpandi / METIS
  METIS: A versatile active learning workflow for optimization of genetic and metabolic networks
  ☆27Updated 2 years ago
• cusbg / traveler
  Template-based RNA secondary structure visualization
  ☆25Updated 3 months ago
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated last year
• Pharmaco-OmicsLab / EasyPubPlot
  Shiny app to easily create publishable plots for scientific papers
  ☆27Updated last week
• matthiaskoenig / brendapy
  BRENDA parser in python
  ☆21Updated 2 years ago
• amaurypm / pseqsid
  Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.
  ☆14Updated last year