RENCI / SegmentorLinks
3D segmention tool
☆13Updated 2 years ago
Alternatives and similar repositories for Segmentor
Users that are interested in Segmentor are comparing it to the libraries listed below
Sorting:
- Script that registers Histology slices to volumetric image data☆11Updated last year
- A napari plugin for itk-elastix☆38Updated last year
- A set of tools to assist in aligning (registering) large numbers of EM images into a coherent image volume in two and three dimensions.☆13Updated 6 years ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- Utils and convenience functions for large-scale bio-image analysis.☆56Updated last week
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆47Updated last year
- ☆10Updated last year
- ☆12Updated last year
- Distributed segmentation for bio-image-analysis☆38Updated last month
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 4 months ago
- ☆21Updated 4 years ago
- MorphoFeatures code and data☆21Updated 2 years ago
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆17Updated last week
- Little OBjects Segmentation and Tracking EnviRonment☆9Updated 4 years ago
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆19Updated 4 years ago
- ☆37Updated last year
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration☆12Updated 3 years ago
- Command line tool for registration of very large 3D volumes.☆14Updated last year
- Simple watershed and agglomeration library for affinity graphs.☆22Updated 7 months ago
- Deep Learning for EM Connectomics☆15Updated 2 years ago
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆32Updated 3 weeks ago
- Aligner for large scale serial section image data☆16Updated last year
- Automated Segmentation of cellular substructures in Electron Microscopy☆17Updated 2 months ago
- Automated mitochondrial segmentation and tracking.☆32Updated 3 years ago
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆72Updated 3 years ago
- simple package for augmentation of n-dimensional arrays☆32Updated last year
- FluoRender is an interactive tool for confocal microscopy data analysis.☆45Updated this week
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆55Updated 2 weeks ago
- Process and analyze surfaces using vedo in napari.☆24Updated last year