Alternatives and similar repositories for careamics

Users that are interested in careamics are comparing it to the libraries listed below

• sakoho81 / miplib
  A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.
  ☆84Updated 3 months ago
• tlambert03 / microsim
  ☆42Updated this week
• weigertlab / trackastra
  Transformer-based cell tracking for live-cell microscopy
  ☆112Updated 2 weeks ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆58Updated 4 months ago
• GuillaumeMougeot / biom3d
  Easy Volumetric Segmentation with Deep Learning
  ☆28Updated 3 weeks ago
• HenriquesLab / NanoPyx
  Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging
  ☆88Updated this week
• napari / napari-animation
  A napari plugin for making animations
  ☆89Updated this week
• napari / napari-plugin-template
  A template repo used to make new napari plugins
  ☆29Updated this week
• True-North-Intelligent-Algorithms / tnia-python
  A collection of useful python utilities from True North Intelligent Algorithms
  ☆42Updated last week
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆27Updated 9 months ago
• haesleinhuepf / stackview
  Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets
  ☆172Updated 6 months ago
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆36Updated 7 months ago
• juglab / DenoiSeg
  Joint training of denoising and segmentation.
  ☆76Updated 2 years ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆30Updated 7 months ago
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆87Updated last week
• stardist / stardist-napari
  StarDist plugin for napari
  ☆38Updated last year
• aelefebv / Mitometer
  Automated mitochondrial segmentation and tracking.
  ☆33Updated 4 years ago
• abcucberkeley / PetaKit5D
  ☆49Updated 3 weeks ago
• haesleinhuepf / devbio-napari
  ☆51Updated 7 months ago
• bioio-devs / bioio
  Image reading, metadata management, and image writing for Microscopy images in Python
  ☆109Updated this week
• peterhpark / neuroclear
  Neuroclear is a deep-learning-based Python module to train a deep neural network for the task of applying super-resolution to degraded ax…
  ☆32Updated 8 months ago
• SuperElastix / elastix-napari
  A napari plugin for itk-elastix
  ☆39Updated last week
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆95Updated this week
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆40Updated 7 months ago
• VolkerH / Lattice_Lightsheet_Deskew_Deconv
  Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data
  ☆26Updated 5 years ago
• cgohlke / roifile
  Read and write ImageJ ROI format.
  ☆83Updated 6 months ago
• yfukai / laptrack
  Particle tracking by solving linear assignment problem.
  ☆60Updated last week
• janelia-cellmap / fibsem-tools
  Tools for handling FIB-SEM data and annotations
  ☆22Updated 8 months ago
• TuragaLab / DECODE
  This is the official implementation of our publication "Deep learning enables fast and dense single-molecule localization with high accur…
  ☆115Updated 2 years ago
• rosalindfranklininstitute / RedLionfish
  ☆36Updated last year