SebastienTs / LOBSTER
Little OBjects Segmentation and Tracking EnviRonment
☆9Updated 4 years ago
Alternatives and similar repositories for LOBSTER:
Users that are interested in LOBSTER are comparing it to the libraries listed below
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- ☆13Updated 5 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated last month
- ☆13Updated 5 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated this week
- MultiModal Big Image Data Sharing and Exploration☆14Updated 2 years ago
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆16Updated this week
- ☆10Updated 5 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 2 weeks ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆9Updated 3 years ago
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆26Updated 2 years ago
- my first baby steps with Napari☆10Updated 5 years ago
- ☆10Updated last month
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 3 years ago
- A collection of demonstration materials for MorphoLibJ.☆12Updated 2 years ago
- A napari plugin to analysis point spread functions.☆12Updated last month
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆15Updated 2 years ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆13Updated this week
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 5 months ago
- An ImageJ script to align and stitch three-dimensional tiles and quickly explore terabyte-sized microscopy datasets☆13Updated 3 years ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated 2 years ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- python tools for BigDataViewer☆22Updated 4 months ago
- ☆17Updated this week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated 3 weeks ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 2 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated 3 months ago
- Process and analyze surfaces using vedo in napari.☆23Updated 11 months ago