OSchoppe / AIMOS
AI-enabled Mouse Organ Segmentation
☆12Updated 4 years ago
Alternatives and similar repositories for AIMOS:
Users that are interested in AIMOS are comparing it to the libraries listed below
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆69Updated 3 years ago
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆231Updated this week
- Script that registers Histology slices to volumetric image data☆11Updated last year
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.☆52Updated 2 months ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆52Updated last week
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆47Updated 9 months ago
- ☆50Updated this week
- An abundance of augmentation layers☆14Updated 2 months ago
- UKBB MRI semantic segmentation for Abdominal Dixon and other modalities☆14Updated last year
- ☆108Updated last month
- Very fast greedy diffeomorphic registration code☆71Updated last week
- ☆20Updated 3 years ago
- Easy Volumetric Segmentation with Deep Learning☆25Updated last month
- A project to provide custom sorting and renaming of dicom files☆77Updated 8 months ago
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utili…☆153Updated 3 weeks ago
- An image analysis workflow for open and reproducible research on femoral knee cartilage☆32Updated 9 months ago
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix☆50Updated 2 weeks ago
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆33Updated 2 years ago
- Utilities for reading and writing files created by 3D Slicer☆39Updated 2 months ago
- A napari plugin for itk-elastix☆38Updated 9 months ago
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration☆11Updated 3 years ago
- 3D Slicer extension which contains a Segment Editor Effect that solidifies and extracts the surface of a segmentation☆28Updated 11 months ago
- A Blender Add-On for making synthetic CT datasets from 3D meshes☆18Updated last month
- Recipes for common medical image segmentation tasks using 3D Slicer☆55Updated 2 years ago
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆124Updated this week
- Medical Image Radiomics Processor☆63Updated this week
- Website for NA-MIC Project Weeks☆86Updated last week
- ☆98Updated this week
- Implementation of the DeepVesselNet deep learning network☆145Updated last year
- The easiest tool for experimenting with radiomics features.☆40Updated 10 months ago