peterhpark / neuroclearLinks
Neuroclear is a deep-learning-based Python module to train a deep neural network for the task of applying super-resolution to degraded axial resolution in fluorescence microscopy, using a single image stack.
☆31Updated 6 months ago
Alternatives and similar repositories for neuroclear
Users that are interested in neuroclear are comparing it to the libraries listed below
Sorting:
- Three-dimensional residual channel attention networks☆55Updated 2 years ago
- Joint training of denoising and segmentation.☆74Updated 2 years ago
- Official PyTorch implementation of the "SN2N" -v0.3.5☆48Updated last week
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆79Updated last month
- code of the registration and deconvolution project☆36Updated 4 years ago
- SRDTrans: Spatial redundancy transformer for self-supervised fluorescence image denoising☆81Updated last year
- A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…☆103Updated this week
- ☆21Updated 4 months ago
- DeepCAD-RT: Real-time denoising of fluorescence time-lapse imaging using deep self-supervised learning☆118Updated 4 months ago
- img2vid☆21Updated 2 years ago
- Repository for codes in the paper "System-and Sample-agnostic Isotropic 3D Microscopy by Weakly Physics-informed, Domain-shift-resistant …☆13Updated last month
- ☆24Updated 2 years ago
- A deeplearning network based on Richardson-Lucy formula☆49Updated 2 years ago
- Official implementation of the Optica 2018 paper "Deep-STORM: super-resolution single-molecule microscopy by deep learning"☆56Updated 5 years ago
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆35Updated 2 years ago
- Official Python implementation of the 'Sparse deconvolution'-v0.3.0☆56Updated last year
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆42Updated 11 months ago
- ☆90Updated last year
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆27Updated 5 years ago
- This is the supplementary code for Dark sectioning. And it is private now☆34Updated 3 months ago
- Combined Repos from DAIN and Zooming SlowMo☆21Updated 2 years ago
- This is the official implementation of our publication "Deep learning enables fast and dense single-molecule localization with high accur…☆113Updated 2 years ago
- Code for StructN2V method and experiments☆22Updated 3 years ago
- Script that registers Histology slices to volumetric image data☆11Updated 2 years ago
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆74Updated 4 years ago
- Utils and convenience functions for large-scale bio-image analysis.☆58Updated 2 months ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆50Updated last year
- A napari plugin for itk-elastix☆39Updated 2 weeks ago
- python functions for simulating optical transfer functions☆76Updated last year
- Zernike Optimized Localization Algorithm for 3D single molecule localizations☆19Updated 3 years ago