sakoho81 / miplib
A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.
☆72Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for miplib
- code of the registration and deconvolution project☆33Updated 3 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆38Updated 3 weeks ago
- Things we use regularly☆29Updated 2 months ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆44Updated 6 months ago
- Automatic Correction for sCMOS-related Noise☆17Updated 3 years ago
- CUDA-accelerated reconstruction for 3D-structured-illumination☆9Updated 3 months ago
- A package for processing diSPIM images with GPU implementation☆11Updated 2 years ago
- Lattice light-sheet post-processing utility.☆27Updated 2 weeks ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆23Updated 4 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆60Updated 2 weeks ago
- python functions for simulating optical transfer functions☆71Updated 7 months ago
- 3D Structured illumination microscopy (3D-SIM) reconstruction software☆28Updated last month
- Neuroclear is a deep-learning-based Python module to train a deep neural network for the task of applying super-resolution to degraded ax…☆27Updated last month
- Image acquisition software for mesoSPIM light-sheet microscopes.☆37Updated this week
- A collection of useful python utilities from True North Intelligent Algorithms☆28Updated this week
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆37Updated 3 weeks ago
- Zernike Optimized Localization Algorithm for 3D single molecule localizations☆14Updated 2 years ago
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆25Updated 2 months ago
- Official implementation of the Optica 2018 paper "Deep-STORM: super-resolution single-molecule microscopy by deep learning"☆51Updated 4 years ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆35Updated 6 years ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆63Updated last month
- Joint training of denoising and segmentation.☆68Updated last year
- ImgLib2/BDV implementation of Stitching for large datasets☆68Updated 2 weeks ago
- Combined Repos from DAIN and Zooming SlowMo☆20Updated last year
- Matlab function to import ROIs from ImageJ☆26Updated 4 years ago
- Three-dimensional residual channel attention networks☆50Updated 2 years ago
- ☆21Updated 3 years ago
- A deeplearning network based on Richardson-Lucy formula☆41Updated last year
- Control, reconstruction, and analysis code for oblique plane microscopy.☆21Updated 3 months ago
- 2D and 3D image deconvolution with python☆13Updated 2 months ago