Orion1618 / OdysseyLinks
Odyssey: A semi-automated pipeline for the prepping, cleaning, phasing, imputing, analyzing, and visualizing genomic data
☆19Updated 4 years ago
Alternatives and similar repositories for Odyssey
Users that are interested in Odyssey are comparing it to the libraries listed below
Sorting:
- Scripts and utilities related to analyzing short tandem repeats (STRs).☆38Updated this week
- Exploration, clustering, visualization and classification of DNA damage patterns☆19Updated 4 years ago
- ☆51Updated 5 years ago
- ☆25Updated 7 years ago
- Opossum is a tool to pre-process RNA-seq reads prior to variant calling.☆28Updated 6 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆34Updated 8 years ago
- Run Picard on BAM files and collate 90 metrics into one file.☆41Updated 7 years ago
- Generic human DNA variant annotation pipeline☆58Updated last year
- processing illumina SNP arrays☆19Updated 8 years ago
- Intersect multiple VCF files with haplotype awareness☆25Updated 4 years ago
- DriverPower☆26Updated 5 months ago
- GWAS QC, PCA, haplotype phasing, genotype imputation☆18Updated last month
- a set of NGS pipelines☆24Updated this week
- Fast and scalable variant annotation tool☆30Updated 3 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆34Updated 7 years ago
- 📊Evaluating, filtering, comparing, and visualising VCF☆28Updated 2 years ago
- A simple script to create a customizable html file from an AnnotSV output.☆19Updated last year
- Mapped QC analysis program☆44Updated 7 years ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆68Updated 3 months ago
- ☆42Updated last month
- UCSC liftOver (genome build converter) for vcf format☆12Updated 7 years ago
- Burden testing against public controls☆50Updated last year
- gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (…☆33Updated 3 years ago
- R package designed to simplify structural variant analysis☆72Updated 3 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 6 years ago
- An integrated R package to evaluate periodicity in large scale data☆27Updated 2 years ago
- SeqMonk NGS visualisation and analysis tool☆49Updated this week
- Documentation for vcfR☆11Updated last month