ODiogoSilva / TriFusionLinks
Streamlining phylogenomic data gathering, processing and visualization
☆89Updated 7 years ago
Alternatives and similar repositories for TriFusion
Users that are interested in TriFusion are comparing it to the libraries listed below
Sorting:
- Easily download genomes and build BLAST/Bowtie indexes in Python☆22Updated 3 years ago
- 📈 DNA Sequence Visualization for Humans☆42Updated 4 years ago
- ☆36Updated 6 months ago
- A lightweight Python graphing API for genomic features☆15Updated 3 years ago
- a simple read-only sequence database, designed for short reads☆66Updated last year
- Efficient handling of FASTQ files from Python☆51Updated 3 months ago
- Monitor computational workflows in real time☆73Updated last year
- The Biological Observation Matrix (BIOM) Format Project☆95Updated 2 weeks ago
- just annotate it, dammit!☆93Updated 2 years ago
- Indexing & querying large assembly graphs -- in space, no one can hear you miao!☆118Updated this week
- Biological Graphic tool in Python☆34Updated 5 years ago
- Draw genetic elements with HTML & CSS☆16Updated 8 years ago
- Git mirror of Bioconductor SRAdb package☆23Updated 7 years ago
- Code for DNA plasmid editing.☆43Updated 7 years ago
- Pandas DataFrames for phylogenetics☆74Updated 4 years ago
- PyCogent: Official repository for software and unit tests☆91Updated 4 years ago
- software for UCE (and general) phylogenomics☆84Updated 7 months ago
- 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies☆17Updated 2 years ago
- Build sourmash databases for genbank.☆11Updated 2 years ago
- Highly customizable, ambiguity-aware dotplots for visual sequence analyses☆93Updated 5 months ago
- fast, memory-efficient, pythonic (and command-line) access to fasta sequence files☆88Updated 7 years ago
- TreeSwift: Fast tree module for Python 3☆84Updated 11 months ago
- Fishers Exact Test for Python (Cython)☆66Updated 7 months ago
- A small program that glues together other programs allowing a user to input a codon alignment in FASTA format and produce an annotated ph…☆18Updated 10 years ago
- Python3 scripts to manipulate FASTA and FASTQ files☆72Updated 7 months ago
- An imagemagick-like frontend to Biopython SeqIO☆116Updated last year
- An approximate sequence pattern matcher for FASTQ/FASTA files.☆31Updated 9 years ago
- Open compressed files in Python☆79Updated 3 weeks ago
- Python 3 library with good support for both reading and writing VCF☆110Updated last month
- A Python package for Biopython that gives feature annotations from GenBank records a new and better life☆14Updated 9 years ago