RP3Net / RP3NetLinks
☆13Updated 7 months ago
Alternatives and similar repositories for RP3Net
Users that are interested in RP3Net are comparing it to the libraries listed below
Sorting:
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆62Updated 3 weeks ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆69Updated 5 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆85Updated 2 weeks ago
- Extension of ThermoMPNN for double mutant predictions☆49Updated 2 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Updated last month
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Updated 11 months ago
- ☆52Updated 6 months ago
- Small_molecule_binder_design_use_pseudocycles☆23Updated last year
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆108Updated last month
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆46Updated last month
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆67Updated last year
- ☆46Updated last year
- Machine learning prediction of enzyme optimum pH☆22Updated 8 months ago
- This repository contains the codebase for the paper "Leveraging ancestral sequence reconstruction for protein representation learning".☆11Updated 8 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆76Updated 2 months ago
- Analysis of alphafold and colabfold results☆32Updated this week
- A command-line interface and Python library for generating AlphaFold3 input files.☆38Updated 6 months ago
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆26Updated 9 months ago
- Predicting high-fitness mutations based on protein inverse folding models☆72Updated 3 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆49Updated this week
- ☆22Updated 11 months ago
- ☆54Updated 4 months ago
- ☆32Updated 10 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆43Updated 7 months ago
- Kuhlman Lab Installation of AlphaFold3☆37Updated 3 months ago
- Official repository for the ProteinDJ protein design pipeline☆77Updated last week
- ☆41Updated last year
- ☆29Updated 2 months ago
- bakerlab pymol scripts☆25Updated 5 years ago