Alternatives and similar repositories for taiga:

Users that are interested in taiga are comparing it to the libraries listed below

• ncbi / pm4ngs
  Project Manager for NGS data analysis
  ☆30Updated 2 years ago
• MaayanLab / appyter
  jinja2-enabled jupyter notebooks
  ☆36Updated 6 months ago
• AlexsLemonade / RNA-Seq-Exercises
  Exercises for training scientists to perform some RNA-seq analyses.
  ☆11Updated 5 years ago
• nextflow-io / nf-sqldb
  SQL support plugin for Nextflow
  ☆26Updated last month
• dnanexus / wdlTools
  WDL tools for parsing, type-checking, and more
  ☆25Updated 7 months ago
• greenelab / generic-expression-patterns
  Distinguishing between generic and experiment-specific gene expression signals.
  ☆12Updated 2 years ago
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆83Updated 5 months ago
• Caleydo / ordino
  Target discovery platform for exploring rankings of genes, disease models, and other entities. @JKU-ICG @datavisyn
  ☆12Updated last year
• NIH-HPC / snakemake-class
  Class materials for the NIH HPC snakemake class
  ☆16Updated 5 months ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆40Updated last year
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated last year
• research-software-ecosystem / content
  A metadata commons to store research software metadata
  ☆41Updated this week
• NCBI-Hackathons / ATACFlow
  An ATAC-seq pipeline wrapped in NextFlow that can be run by Jupyter
  ☆14Updated 6 years ago
• ismms-himc / codex_dashboard
  Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data
  ☆16Updated last year
• rnabioco / practical-data-analysis
  Short course using RStudio for biological data analysis
  ☆14Updated 2 years ago
• schlegelp / catheat
  Plot categorical heatmaps with seaborn
  ☆18Updated 2 years ago
• hammerlab / cohorts
  Utilities for analyzing mutations and neoepitopes in patient cohorts
  ☆20Updated 6 years ago
• gmiaslab / pyiomica
  PyIOmica (pyiomica) is a Python package for omics analyses.
  ☆15Updated 2 years ago
• ga4gh-discovery / data-connect
  Standard for describing and searching biomedical data developed by the Global Alliance for Genomics & Health.
  ☆24Updated last year
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated 7 months ago
• JonnyTran / OpenOmics
  A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.
  ☆32Updated 8 months ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 5 years ago
• JaneliaSciComp / nextflow-spark
  ☆14Updated 2 years ago
• Rothamsted / knetminer
  KnetMiner - webapp to search and visualize genome-scale knowledge graphs
  ☆25Updated this week
• broadinstitute / wdl-runner
  Easily run WDL workflows on GCP
  ☆13Updated 3 years ago
• cancerdatasci / demeter
  Deconvolution of seed effects from gene effects in large scale RNAi screens
  ☆10Updated 6 years ago
• fairgenomes / fairgenomes-semantic-model
  FAIR Genomes semantic metadata model. The core is a YAML file, which is transformed into all other desired output formats.
  ☆12Updated 2 weeks ago
• sapporo-wes / sapporo-service
  A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…
  ☆22Updated 2 months ago
• loosolab / UROPA
  Universal RObust Peak Annotator
  ☆15Updated last year
• MaayanLab / biojupies-plugins
  User-submitted RNA-seq data analysis tools for BioJupies.
  ☆19Updated 3 years ago