STAgent is a multimodal LLM-based AI agent that enables deep research about spatial transcriptomics data
☆53May 22, 2026Updated last week
Alternatives and similar repositories for STAgent
Users that are interested in STAgent are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Nov 7, 2025Updated 6 months ago
- ☆12Aug 27, 2024Updated last year
- A Soul-grounded Minecraft social simulation runtime where Mineflayer actors pursue LifeGoals through evidence-backed action skills and tr…☆19Updated this week
- ☆15Aug 15, 2021Updated 4 years ago
- autoredteam: code for training models that automatically red team other language models☆16Aug 9, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12May 12, 2023Updated 3 years ago
- Sagemaker Studio Docker UI Extension☆11Apr 17, 2024Updated 2 years ago
- MCP server for single cell analysis☆12May 15, 2025Updated last year
- cross-species analysis of cell identities, markers and regulations☆13Jul 11, 2025Updated 10 months ago
- Repository for the clone2vec python package☆20May 6, 2026Updated 3 weeks ago
- An online database of variants functionally demonstrated to affect (or not affect) splicing.☆11Apr 28, 2026Updated last month
- ☆16May 6, 2026Updated 3 weeks ago
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆43Dec 18, 2025Updated 5 months ago
- Pipeline to find transcription factor footprints in DNase-seq or ATAC-seq datasets☆13Nov 24, 2018Updated 7 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Analysis of Multivariate Event Times https://kkholst.github.io/mets/☆14Updated this week
- A Course on designing high-throughput experiments☆13Sep 25, 2024Updated last year
- Whole Genome Annotation Pipeline☆16Jun 20, 2025Updated 11 months ago
- napari plugin engine v2☆19May 19, 2026Updated last week
- Constructing gene regulatory networks by integrating scRNA-seq and scATAC-seq data☆13Dec 7, 2021Updated 4 years ago
- A highly scalable and accurate inference of gene expression and structure for single-cell transcriptomes using semi-supervised deep learn…☆11May 19, 2021Updated 5 years ago
- A tutorial on how to annotate and interpret novel mammalian reference genomes☆26Mar 4, 2026Updated 2 months ago
- A toolkit to bulk-submission, download, analysis and summarizing data from abYsis.org☆10Apr 20, 2020Updated 6 years ago
- ☆19Jul 28, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆10Dec 17, 2025Updated 5 months ago
- ☆19Dec 1, 2021Updated 4 years ago
- Some NGS workflow created by snakemake☆14Jan 15, 2025Updated last year
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Apr 28, 2026Updated last month
- ☆29May 21, 2026Updated last week
- Multigrate: multiomic data integration for single-cell genomics☆33Updated this week
- Python implementations for Sparse CCA☆21Feb 24, 2023Updated 3 years ago
- ☆20Mar 31, 2025Updated last year
- ☆23Jan 6, 2026Updated 4 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆19Dec 19, 2024Updated last year
- Dynamic Multivariate Data Analysis and Visualization Platform☆41Nov 8, 2015Updated 10 years ago
- A tissue-specific single-cell biological age model☆14Jul 26, 2023Updated 2 years ago
- Project bulk/single-cell RNA-seq data to given LSI space☆11Jan 17, 2022Updated 4 years ago
- 在R语言中使用ChatGPT(中国大陆版)☆12Mar 17, 2023Updated 3 years ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆17Mar 17, 2026Updated 2 months ago
- Convert AI Skills (Claude Skills format) to MCP server resources - Part of BioContextAI☆26Feb 27, 2026Updated 3 months ago