LeonSong1995 / gsMap
☆35Updated last week
Alternatives and similar repositories for gsMap:
Users that are interested in gsMap are comparing it to the libraries listed below
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Updated 4 years ago
- ☆29Updated last year
- An integrated platform for modeling gene-regulatory dynamics and networks☆30Updated 6 months ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆69Updated 4 months ago
- This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…☆35Updated last year
- MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…☆41Updated 6 months ago
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆16Updated 2 months ago
- ☆17Updated 5 months ago
- ☆31Updated 7 months ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆21Updated 3 weeks ago
- ☆25Updated last week
- ☆14Updated last year
- scripts associated with NAFLD-NASH project☆20Updated 8 months ago
- ☆13Updated last year
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated last year
- ☆23Updated last year
- single-cell clustering based on alternative splicing landscapes☆16Updated 10 months ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆36Updated last year
- identifying disease critical cell types and programs from single cell RNAseq☆52Updated 2 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆43Updated 5 months ago
- Functions for single cell data analysis☆29Updated 3 years ago
- pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.☆59Updated 2 weeks ago
- ☆29Updated 2 years ago
- SNV calling from single cell sequencing☆91Updated 2 months ago
- ☆31Updated 9 months ago
- Functional Inference of Gene Regulation☆39Updated 6 months ago
- ☆47Updated 4 months ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆54Updated last year
- ☆15Updated 7 months ago