Alternatives and similar repositories for SmartPeak

Users that are interested in SmartPeak are comparing it to the libraries listed below

• metgem / metgem
  Calculation and visualization of molecular networks based on t-SNE algorithm
  ☆35Updated 10 months ago
• OpenMS / pyopenms-docs
  pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.
  ☆49Updated last week
• bittremieuxlab / spectrum_utils
  Python package for efficient mass spectrometry data processing and visualization
  ☆161Updated last week
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated last month
• MatteoLacki / IsoSpec
  Libraries for fine isotopic structure calculator.
  ☆41Updated 2 weeks ago
• OpenMS / pyopenms_viz
  Streamlining Mass Spectrometry Data Visualization with Pandas
  ☆20Updated this week
• ursgal / ursgal
  Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis
  ☆43Updated last month
• HUPO-PSI / mzSpecLib
  mzSpecLib: A standard format to exchange/distribute spectral libraries
  ☆30Updated last month
• michaelmarty / UniDec
  Universal Deconvolution of Mass and Ion Mobility Spectra
  ☆80Updated last week
• HUPO-PSI / psi-ms-CV
  HUPO-PSI mass spectrometry CV
  ☆39Updated last week
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆53Updated last month
• sirius-ms / sirius-libs
  sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java
  ☆54Updated last year
• HUPO-PSI / mzQC
  Reporting and exchange format for mass spectrometry quality control data
  ☆32Updated 2 weeks ago
• mobiusklein / ms_deisotope
  A library for deisotoping and charge state deconvolution of complex mass spectra
  ☆41Updated 4 months ago
• Nesvilab / philosopher
  PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering
  ☆121Updated 2 weeks ago
• YuanyueLi / group-dia
  Group-DIA, a software for analyzing multiple DIA data files
  ☆13Updated 9 years ago
• frallain / pymsfilereader
  Thermo MSFileReader Python bindings
  ☆69Updated 4 years ago
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆56Updated 3 weeks ago
• lmsac / DeepDIA
  Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.
  ☆43Updated 3 years ago
• bihealth / NeatMS
  NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
  ☆33Updated 4 years ago
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆55Updated 2 weeks ago
• pymzml / pymzML
  pymzML - an interface between Python and mzML Mass spectrometry Files
  ☆179Updated last week
• mzmine / mzmine2
  MZmine 2 source code repository
  ☆134Updated last year
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆49Updated 9 months ago
• ProteomicsML / ProteomicsML
  Community-curated tutorials and datasets for ML in proteomics
  ☆55Updated last month
• UWPR / Comet
  An tandem mass spectrometry (MS/MS) sequence database search tool.
  ☆53Updated this week
• MannLabs / alphapeptstats
  Python Package for the downstream analysis of mass-spectrometry-based proteomics data
  ☆79Updated last month
• MannLabs / alphapept
  A modular, python-based framework for mass spectrometry. Powered by nbdev.
  ☆183Updated last year
• eMetaboHUB / FragHub
  ☆14Updated 3 weeks ago
• MetaSys-LISBP / IsoCor
  IsoCor: Isotope Correction for mass spectrometry labeling experiments
  ☆25Updated 8 months ago