PLMFit platform for TL on PLMs
☆22Aug 13, 2025Updated 11 months ago
Alternatives and similar repositories for plmfit
Users that are interested in plmfit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Nov 24, 2025Updated 8 months ago
- A computational method to optimize degenerate codons for synthesizing an informed combinatorial mutagenesis protein variant library☆17Feb 18, 2025Updated last year
- ☆13Sep 25, 2022Updated 3 years ago
- BRENDA parser in python☆23May 16, 2022Updated 4 years ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆49Nov 4, 2025Updated 8 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆15Jun 19, 2026Updated last month
- Code for the DiscoTope-3.0 paper and model☆19May 5, 2026Updated 2 months ago
- The GB99dms implicit solvent force field for proteins, plus scripts and data☆27Sep 19, 2025Updated 10 months ago
- ELViM is a method for visualizing the energy landscapes of biomolecules simulations.☆16Aug 18, 2025Updated 11 months ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆37Dec 8, 2025Updated 7 months ago
- Efficient manipulation of protein structures in Python☆68Jun 16, 2026Updated last month
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆137Apr 25, 2026Updated 3 months ago
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆61Nov 5, 2025Updated 8 months ago
- Implementation code for the paper "Aggregating Residue-Level Protein Language Model Embeddings with Optimal Transport"☆25May 3, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A drop-in replacement for Rosetta Relax☆30Jan 30, 2026Updated 5 months ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 7 months ago
- nanobody melting temperature prediction using protein embeddings☆13Feb 24, 2025Updated last year
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 4 months ago
- ☆80Oct 27, 2021Updated 4 years ago
- Probabilistic Graphical Models in Python3.☆24Jun 4, 2025Updated last year
- Systematic Multi-Trait AAV Capsid Engineering for Efficient Gene Delivery (Eid et al., Nature Communications, 2024)☆13Aug 26, 2024Updated last year
- Virus Protein Structural Analysis Toolkit☆14Sep 9, 2024Updated last year
- ☆22Jul 14, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Reference-free analysis of genetic architecture☆23Sep 21, 2024Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆114Apr 15, 2026Updated 3 months ago
- Structure-Informed Protein Language Model☆39Feb 15, 2024Updated 2 years ago
- A constraint-based method for prediction of metabolic engineering targets using ecModels of metabolism☆15Feb 12, 2025Updated last year
- Software for the prediction of DEER and PRE data from conformational ensembles.☆14May 6, 2025Updated last year
- ProteomeLM: A proteome-scale language model allowing fast prediction of protein-protein interactions and gene essentiality across taxa☆36Jun 10, 2026Updated last month
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 3 years ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Jul 25, 2024Updated 2 years ago
- ColabFold protocol☆61Oct 17, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Degenerate Codon Design☆13Feb 13, 2020Updated 6 years ago
- This repository contains the official implementation of the paper "BioGraphFusion: Graph Knowledge Embedding for Biological Completion an…☆16Nov 5, 2025Updated 8 months ago
- 代谢网络模型构建和使用实操☆33Mar 18, 2023Updated 3 years ago
- RXN for biochemical reactions☆76Oct 18, 2022Updated 3 years ago
- Repository for the paper A generative artificial intelligence approach for antibiotic optimization☆16Mar 26, 2026Updated 4 months ago
- Reaction-Conditioned Virtual Screening of Enzymes☆46Jun 13, 2026Updated last month
- Coloring molecules with explainable artificial intelligence☆16Feb 8, 2021Updated 5 years ago