PLMFit platform for TL on PLMs
☆20Aug 13, 2025Updated 8 months ago
Alternatives and similar repositories for plmfit
Users that are interested in plmfit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆20Nov 24, 2025Updated 4 months ago
- ELViM is a method for visualizing the energy landscapes of biomolecules simulations.☆12Aug 18, 2025Updated 7 months ago
- A computational method to optimize degenerate codons for synthesizing an informed combinatorial mutagenesis protein variant library☆17Feb 18, 2025Updated last year
- ☆13Sep 25, 2022Updated 3 years ago
- BRENDA parser in python☆23May 16, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆48Nov 4, 2025Updated 5 months ago
- The GB99dms implicit solvent force field for proteins, plus scripts and data☆27Sep 19, 2025Updated 6 months ago
- Implementation code for the paper "Aggregating Residue-Level Protein Language Model Embeddings with Optimal Transport"☆22May 3, 2025Updated 11 months ago
- A protein language model for learning the SARS-CoV-2 fitness landscape☆12Apr 22, 2025Updated 11 months ago
- Efficient manipulation of protein structures in Python☆67Sep 27, 2025Updated 6 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆127Updated this week
- PPI version of Pythia☆33Sep 12, 2025Updated 7 months ago
- nanobody melting temperature prediction using protein embeddings☆11Feb 24, 2025Updated last year
- A customizable script for Linux to connect to the ETHZ vpn using openconnect☆14Nov 18, 2025Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Constant pH simulation with OpenMM☆19Mar 10, 2026Updated last month
- FeatureDock is a protein-ligand docking software guided by physicochemical feature-based local environment learning using Transformer☆39Oct 9, 2024Updated last year
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 4 months ago
- ☆119Feb 1, 2026Updated 2 months ago
- ☆21Sep 12, 2024Updated last year
- A drop-in replacement for Rosetta Relax☆27Jan 30, 2026Updated 2 months ago
- MPEK is a universal tool for predicting enzyme turnover number (kcat) and Michaelis-Menten constant (Km) for all types of enzymes. BTW, a…☆28Aug 21, 2024Updated last year
- Systematic Multi-Trait AAV Capsid Engineering for Efficient Gene Delivery (Eid et al., Nature Communications, 2024)☆11Aug 26, 2024Updated last year
- Virus Protein Structural Analysis Toolkit☆13Sep 9, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Software for the prediction of DEER and PRE data from conformational ensembles.☆14May 6, 2025Updated 11 months ago
- ☆23Jul 14, 2023Updated 2 years ago
- Reference-free analysis of genetic architecture☆22Sep 21, 2024Updated last year
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆160Updated this week
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆102Dec 10, 2025Updated 4 months ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆39Jul 25, 2024Updated last year
- Structure-Informed Protein Language Model☆38Feb 15, 2024Updated 2 years ago
- ☆67Mar 18, 2026Updated 3 weeks ago
- protein folding app running on modal☆27Mar 19, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago
- Degenerate Codon Design☆13Feb 13, 2020Updated 6 years ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆120Oct 30, 2025Updated 5 months ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆36Dec 8, 2025Updated 4 months ago
- Code for the DiscoTope-3.0 paper and model☆14Mar 19, 2026Updated 3 weeks ago
- Reaction-Conditioned Virtual Screening of Enzymes☆42Jun 11, 2025Updated 10 months ago
- Discovering Interpretable Features in Protein Language Models via Sparse Autoencoders☆285Oct 31, 2025Updated 5 months ago