JuliaPalacios / phylodynLinks
☆9Updated 2 weeks ago
Alternatives and similar repositories for phylodyn
Users that are interested in phylodyn are comparing it to the libraries listed below
Sorting:
- Demographic inference from whole genomes☆13Updated 2 years ago
- machine learning applications for dadi☆15Updated 5 months ago
- genotype dimensionality reduction with a VAE☆46Updated 4 months ago
- ☆11Updated 2 years ago
- Automated and distributed population genetic model inference from allele frequency spectra☆17Updated 3 months ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 7 years ago
- ☆20Updated 9 months ago
- MOran Models for Inference☆9Updated 7 years ago
- Simulation of Epistasis Local adaptation, with Ancestry and Mate choice☆11Updated 2 years ago
- ☆14Updated last month
- Homologizer: phasing gene copies into polyploid subgenomes☆10Updated 2 years ago
- Fast and accurate tool for estimating genomic distances between genome-skims☆45Updated last year
- [mu]tation [s]pectrum [h]istory [i]nference☆26Updated 6 months ago
- heterozygosity-based estimator of Rho - https://academic.oup.com/genetics/advance-article/doi/10.1093/genetics/iyac100/6623412☆10Updated last year
- A tool for divide-and-conquer tree estimation via a shared distance matrix☆10Updated 6 years ago
- Work for the tree sequence inference paper.☆23Updated 4 years ago
- Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation☆16Updated 2 months ago
- Estimation of per-individual inbreeding coefficients under a probabilistic framework☆19Updated last year
- ☆20Updated 4 years ago
- Infer the age of ancestral nodes in a tree sequence.☆21Updated this week
- TEFLoN uses paired-end illumina sequence data to discover and genotype transposable elements present in your samples.☆13Updated 4 years ago
- ☆26Updated 3 years ago
- A derivative of GenomeScope2.0 modified to work with FastK☆9Updated last year
- ☆10Updated 3 years ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆32Updated 3 years ago
- Site frequency spectrum estimation based on window expectation-maximisation algorithm☆13Updated 2 years ago
- defiNETti is a program for performing Bayesian inference on exchangeable (or permutation-invariant) data via deep learning. In particula…☆20Updated 7 years ago
- Scaffolding with assembly likelihood optimization☆22Updated 4 years ago
- ☆18Updated 3 weeks ago
- The GitHub for CLUES2, a method for inferring and evaluating evidence for selection.☆14Updated 3 months ago