IBM / QBioCodeLinks
QBioCode is a suite of computational resources to support quantum applications in healthcare and life science data.
☆31Updated last week
Alternatives and similar repositories for QBioCode
Users that are interested in QBioCode are comparing it to the libraries listed below
Sorting:
- This repository contains the code for our manuscript - 'The evolution, evolvability, and engineering gene regulatory DNA'☆96Updated 2 years ago
- ☆34Updated last year
- Biological sequence analysis for the modern age.☆261Updated 2 weeks ago
- Pytorch implementation of the Borzoi model from Calico, and Flashzoi, a 3x faster Borzoi enhancement.☆92Updated 2 months ago
- Computational Optimization of DNA Activity (CODA)☆67Updated 10 months ago
- deep learning-inspired explainable sequence model for transcription initiation☆100Updated 11 months ago
- gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.☆314Updated last week
- ☆86Updated 2 years ago
- ☆72Updated 2 years ago
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆174Updated 3 months ago
- ☆42Updated last week
- ☆100Updated 3 months ago
- A visible neural network model for drug response prediction☆151Updated 2 years ago
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆43Updated 7 months ago
- C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.☆82Updated last year
- Chromosome polymer simulations and in silico capture experiments☆54Updated 2 months ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆73Updated last week
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆57Updated 6 years ago
- predicting expression effects of human genome variants ab initio from sequence☆132Updated last year
- Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Droso…☆72Updated 2 years ago
- code to run sei and obtain sei and sequence class predictions☆111Updated 3 years ago
- code to run EPInformer for gene expression prediction and gene-enhancer link prediction☆44Updated 2 weeks ago
- RNA-seq prediction with deep convolutional neural networks.☆223Updated 5 months ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆191Updated last year
- Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/☆291Updated 7 months ago
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆123Updated 4 months ago
- Draw RNA secondary structures in python.☆49Updated 7 months ago
- A framework for state-of-the-art pre-trained bio foundation models on genomics and transcriptomics modalities.☆188Updated last week
- A lite implementation of tfmodisco, a motif discovery algorithm for genomics experiments.☆87Updated 4 months ago
- TF MOtif Discovery from Importance SCOres☆163Updated last month