Alternatives and similar repositories for Malis-Loss:

Users that are interested in Malis-Loss are comparing it to the libraries listed below

• ilastik / nature_methods_multicut_pipeline
  ☆20Updated 4 years ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆54Updated 2 weeks ago
• funkey / waterz
  Simple watershed and agglomeration library for affinity graphs.
  ☆22Updated 5 months ago
• stardist / augmend
  simple package for augmentation of n-dimensional arrays
  ☆32Updated last year
• constantinpape / affogato
  Affinity based segmentation algorithms and tools
  ☆9Updated 3 years ago
• cremi / cremi_python
  Python scripts to read and write the CREMI hdf5 file format.
  ☆38Updated 2 years ago
• mhaft / DeepVess
  ☆29Updated last year
• volume-em / empanada
  Panoptic segmentation algorithms for 2D and 3D electron microscopy images
  ☆2Updated 2 years ago
• funkelab / lsd
  🌈
  ☆54Updated 3 weeks ago
• constantinpape / torch-em
  Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.
  ☆93Updated this week
• seung-lab / DeepEM
  Deep Learning for EM Connectomics
  ☆14Updated 2 years ago
• GuillaumeMougeot / biom3d
  Easy Volumetric Segmentation with Deep Learning
  ☆25Updated 3 weeks ago
• divelab / deepem3d
  ☆18Updated 7 years ago
• MMV-Lab / mmv_im2im
  Python package for deep learning based image to image transformation
  ☆52Updated 10 months ago
• volume-em / cem-dataset
  Utilities for building and using the CEM dataset for unsupervised pre-training and downstream tasks.
  ☆28Updated 2 years ago
• CAREamics / careamics
  A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…
  ☆78Updated this week
• juglab / DenoiSeg
  Joint training of denoising and segmentation.
  ☆71Updated last year
• AntonotnaWang / 3DCellSeg
  Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…
  ☆22Updated 2 years ago
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated 2 months ago
• neel-dey / AnyStar
  [WACV 2024] AnyStar: Domain randomized universal star-convex 3D instance segmentation
  ☆16Updated 10 months ago
• kreshuklab / MorphoFeatures
  MorphoFeatures code and data
  ☆20Updated last year
• yanglf1121 / NuSeT
  NuSeT: A Deep Learning Tool for Reliably Separating and Analyzing Crowded Cells
  ☆20Updated 4 years ago
• janelia-cellmap / fibsem-tools
  Tools for handling FIB-SEM data and annotations
  ☆21Updated 3 weeks ago
• computational-cell-analytics / medico-sam
  Segment Anything for Medical Imaging
  ☆18Updated last week
• MIC-DKFZ / napari-nninteractive
  ☆62Updated last month
• Project-MONAI / MetricsReloaded
  ☆84Updated 4 months ago
• funkey / mala
  Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).
  ☆12Updated 3 years ago
• constantinpape / cluster_tools
  Distributed segmentation for bio-image-analysis
  ☆37Updated 2 weeks ago
• RUB-Bioinf / VesselExpress
  🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes
  ☆47Updated 10 months ago
• funalab / QCANet
  Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development
  ☆31Updated last year