HelmholtzAI-Consultants-Munich / Malis-LossView external linksLinks
Tensorflow and Pytorch Version of Malis Loss
☆17Nov 8, 2020Updated 5 years ago
Alternatives and similar repositories for Malis-Loss
Users that are interested in Malis-Loss are comparing it to the libraries listed below
Sorting:
- Uncertainty-Aware Label Rectification for Domain Adaptive Mitochondria Segmentation in MICCAI 2021☆14Jun 22, 2021Updated 4 years ago
- Multiple file format reading directly into napari using pure Python☆39Oct 15, 2025Updated 4 months ago
- Content-adaptive storage and processing of large volumetric microscopy data using the Adaptive Particle Representation (APR)☆21Aug 21, 2024Updated last year
- ☆17Feb 3, 2018Updated 8 years ago
- CellTracker: An Automated Toolbox for Single-Cell Segmentation and Tracking in Microscopy Images☆20Dec 2, 2020Updated 5 years ago
- A python package for semi-structured deep distributional regression☆23Dec 9, 2022Updated 3 years ago
- MALIS structured loss function for supervised learning of segmentation and clustering☆18Jun 24, 2023Updated 2 years ago
- Python module for registering and fusing multi-view microscopy data☆24Mar 8, 2025Updated 11 months ago
- Reference implementation of the Graph Exchange File Format☆36Feb 4, 2026Updated last week
- 3D shape analysis using deep learning☆29Oct 8, 2025Updated 4 months ago
- Simple watershed and agglomeration library for affinity graphs.☆28Sep 18, 2025Updated 4 months ago
- 🌈☆67Oct 10, 2025Updated 4 months ago
- A python algorithm for tracking cells in 3D deforming organs☆68Nov 13, 2025Updated 3 months ago
- Explainability for Random Forest Models.☆32Jan 23, 2026Updated 3 weeks ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆70Sep 29, 2024Updated last year
- simple package for augmentation of n-dimensional arrays☆34Aug 10, 2023Updated 2 years ago
- UNRAVEL: UN-biased high-Resolution Analysis and Validation of Ensembles using Light sheet images☆13Feb 10, 2026Updated last week
- DREEM Relates Every Entities' Motion (DREEM). Global Tracking Transformers for biological multi-object tracking.☆13Updated this week
- An R toolbox for analysing movement across space and time☆10Jan 16, 2026Updated last month
- A GUI based on napari for counting cells automatically in cell migration experiments☆46Nov 21, 2022Updated 3 years ago
- Accepted by ISBI 2022 (Oral)☆39Apr 9, 2022Updated 3 years ago
- A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.☆14Updated this week
- PyTorch implementation for our ICCV 2023 paper Not Every Side Is Equal: Localization Uncertainty Estimation for Semi-Supervised 3D Object…☆13May 27, 2024Updated last year
- Prototype implementation of napari-integrated CNN training viewer☆14Dec 27, 2024Updated last year
- Proof-of-principle studies with conditional generative adversarial networks to denoise Cryo-EM images☆10Oct 11, 2018Updated 7 years ago
- Jupyter-based tool for membrane segmentation manipulation☆10Jul 9, 2025Updated 7 months ago
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated 11 months ago
- A napari plugin for counting organoids from brightfield microscopy images with deep learning☆13Feb 4, 2026Updated last week
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- Collection of probe description for probeinterface☆17Jan 29, 2026Updated 2 weeks ago
- Brain flatmaps generation☆11Oct 5, 2022Updated 3 years ago
- ☆10Mar 15, 2023Updated 2 years ago
- brainglobe.info website☆13Updated this week
- analysis tools for large-scale neural recordings☆16Apr 4, 2025Updated 10 months ago
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 3 years ago
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Sep 28, 2020Updated 5 years ago
- CloudReg☆11Apr 5, 2024Updated last year
- ☆18Jul 31, 2025Updated 6 months ago
- StarDist plugin for napari☆38Aug 24, 2024Updated last year