Alternatives and similar repositories for Malis-Loss

Users that are interested in Malis-Loss are comparing it to the libraries listed below

• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆57Updated 2 weeks ago
• funkey / waterz
  Simple watershed and agglomeration library for affinity graphs.
  ☆25Updated 9 months ago
• ilastik / nature_methods_multicut_pipeline
  ☆21Updated 4 years ago
• funkelab / lsd
  🌈
  ☆59Updated 4 months ago
• haesleinhuepf / napari-workflow-optimizer
  Optimize image processing workflows in napari
  ☆18Updated 3 months ago
• constantinpape / affogato
  Affinity based segmentation algorithms and tools
  ☆10Updated 3 months ago
• stardist / augmend
  simple package for augmentation of n-dimensional arrays
  ☆34Updated 2 years ago
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated 5 months ago
• funkelab / motile
  Multi-Object Tracker using Integer Linear Equations
  ☆37Updated last month
• divelab / deepem3d
  ☆17Updated 7 years ago
• constantinpape / cluster_tools
  Distributed segmentation for bio-image-analysis
  ☆38Updated 3 months ago
• Sentinal4D / cellshape
  3D shape analysis using deep learning
  ☆26Updated last year
• janelia-cellmap / fibsem-tools
  Tools for handling FIB-SEM data and annotations
  ☆22Updated 4 months ago
• zudi-lin / pytorch_connectomics
  PyTorch Connectomics: segmentation toolbox for EM connectomics
  ☆179Updated last month
• weigertlab / trackastra
  Transformer-based cell tracking for live-cell microscopy
  ☆82Updated 2 weeks ago
• seung-lab / DeepEM
  Deep Learning for EM Connectomics
  ☆15Updated 2 years ago
• kreshuklab / MorphoFeatures
  MorphoFeatures code and data
  ☆21Updated 2 years ago
• janelia-cellmap / heinrich-2021a
  Resources for Heinrich et al., 2021
  ☆18Updated 4 years ago
• nadavyayon / Intensify3D
  Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…
  ☆19Updated 4 years ago
• MMV-Lab / mmv_im2im
  Python package for deep learning based image to image transformation
  ☆53Updated last month
• CAREamics / careamics
  A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…
  ☆97Updated this week
• WenChentao / 3DeeCellTracker
  A python algorithm for tracking cells in 3D time lapse images.
  ☆62Updated 4 months ago
• janelia-cellmap / cellmap-segmentation-challenge
  Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for …
  ☆36Updated 2 weeks ago
• betaseg / cellsketch
  ☆10Updated last year
• AntonotnaWang / 3DCellSeg
  Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…
  ☆22Updated 2 years ago
• CRBS / cdeep3m
  Please go to https://github.com/CRBS/cdeep3m2 for most recent version
  ☆59Updated 5 years ago
• live-image-tracking-tools / traccuracy
  Utilities for computing common accuracy metrics on cell tracking solutions with ground truth
  ☆36Updated last week
• brisvag / napari-label-interpolator
  ☆12Updated last year
• uhlmanngroup / splinedist
  SplineDist: Automated Cell Segmentation with Spline Curves
  ☆67Updated 10 months ago
• fmi-basel / LSTree
  LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.
  ☆19Updated 2 years ago