neel-dey / AnyStarLinks
[WACV 2024] AnyStar: Domain randomized universal star-convex 3D instance segmentation
β17Updated 3 months ago
Alternatives and similar repositories for AnyStar
Users that are interested in AnyStar are comparing it to the libraries listed below
Sorting:
- πβ66Updated 2 months ago
- PyTorch Connectomics: segmentation toolbox for EM connectomicsβ186Updated last week
- π¬π₯ Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumesβ53Updated last year
- Simple watershed and agglomeration library for affinity graphs.β26Updated 3 months ago
- panoptica -- instance-wise evaluation of 3D semantic and instance segmentation mapsβ27Updated 3 months ago
- β92Updated 6 months ago
- β30Updated last year
- nnInteractive plugin for Napari - nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points,β¦β103Updated 2 months ago
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learningβ74Updated 4 years ago
- Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for β¦β39Updated this week
- Python scripts to read and write the CREMI hdf5 file format.β39Updated 2 years ago
- Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registrationβ72Updated 2 months ago
- Easy Volumetric Segmentation with Deep Learningβ28Updated last month
- Image analysis approaches to analyze the OAI magnetic resonance imagesβ27Updated last year
- Open library for LDDMM and Metamorphosis in PyTorchβ23Updated last week
- Deep Implicit Optimization for Robust and Flexible Image Registrationβ13Updated 4 months ago
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Instβ¦β71Updated 3 years ago
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeveβ¦β22Updated 2 years ago
- Neuroimaging in PyTorchβ100Updated 2 weeks ago
- PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapesβ26Updated 2 years ago
- β39Updated 2 years ago
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.β111Updated last week
- β11Updated 2 years ago
- Masked Autoencoder Guided Segmentation at Pixel Resolutionβ17Updated 2 years ago
- [NeurIPS 2024] Deep Learning in Medical Image Registration: Magic or Mirage?β17Updated last year
- Utilities for building and using the CEM dataset for unsupervised pre-training and downstream tasks.β29Updated 3 years ago
- MorphoFeatures code and dataβ22Updated 2 years ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vesselsβ¦β50Updated 2 years ago
- Segment anything with our Napari integration of Meta AI's Segment Anything Model (SAM)!β243Updated last year
- Persistent homology calculation for 1D (scalar time series), 2D (image), and 3D, 4D (voxel) arraysβ58Updated last month