CellTracker: An Automated Toolbox for Single-Cell Segmentation and Tracking in Microscopy Images
☆20Dec 2, 2020Updated 5 years ago
Alternatives and similar repositories for CellTracker
Users that are interested in CellTracker are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Feb 3, 2018Updated 8 years ago
- This code was submitted to Cell Tracking Challenge, ISBI 2020.☆14May 19, 2021Updated 5 years ago
- ImageJ plugin for building figures☆16Sep 13, 2023Updated 2 years ago
- Tensorflow and Pytorch Version of Malis Loss☆17Nov 8, 2020Updated 5 years ago
- A Micro-Manager plugin that loads easily reconfigurable user interfaces.☆11Aug 30, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆18May 26, 2023Updated 3 years ago
- 3D segmention tool☆13Apr 6, 2023Updated 3 years ago
- Public release of Monoqlo Python code☆10Apr 19, 2022Updated 4 years ago
- [ECCV 2022] Official PyTorch implementation of the paper - Graph Neural Network for Cell Tracking in Microscopy Videos☆81Nov 30, 2022Updated 3 years ago
- ☆15Dec 13, 2020Updated 5 years ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆27Sep 26, 2024Updated last year
- Event-based Blurry Frame Interpolation under Blind Exposure, CVPR2023☆14Jun 21, 2023Updated 3 years ago
- MethodsJ2☆14May 6, 2022Updated 4 years ago
- CloudReg☆11Apr 5, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data☆200Updated this week
- napari plugin for trackastra☆18Jul 16, 2026Updated 3 weeks ago
- ☆15Sep 11, 2023Updated 2 years ago
- A friendly introduction to GitHub as part of @OpenDataManchester's Pick N Mix series.☆13Jul 28, 2021Updated 5 years ago
- Scripts to extract features of cortical folding from MRI☆13Mar 10, 2025Updated last year
- A Board Game to teach co-localization analysis☆15Nov 1, 2024Updated last year
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆78Aug 23, 2021Updated 4 years ago
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆54Jun 20, 2025Updated last year
- GPU accelerated 3D image deconvolution using CUDA☆39Jul 18, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated 3 months ago
- From our paper "OSMO: Online Specific Models for Occlusion in Multiple Object Tracking under Surveillance Scene" in ACM Multimedia 2018.☆11Apr 9, 2019Updated 7 years ago
- Weakly-Supervised Cell Tracking via Backward-and-Forward Propagation, in ECCV 2020☆11Aug 4, 2020Updated 6 years ago
- simple package for augmentation of n-dimensional arrays☆33Aug 10, 2023Updated 3 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆21Feb 10, 2026Updated 6 months ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Feb 9, 2020Updated 6 years ago
- Demonstration and tutorial notebooks for the Higra library☆13Sep 29, 2025Updated 10 months ago
- 《统计学习方法_李航》每章算法的具体实现(不依赖与其他库)☆11Feb 20, 2017Updated 9 years ago
- ☆12Mar 25, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Motion Deblurring via Spatial-Temporal Collaboration of Frames and Events☆16Jun 4, 2025Updated last year
- Official repository for the ECCV 2024 paper, "CMTA: Cross-Modal Temporal Alignment for Event-guided Video Deblurring", ECCV 2024☆17Jul 16, 2025Updated last year
- This is the implementation of Embedded Prompt Tuning(EPT).☆14Feb 10, 2025Updated last year
- ☆12Sep 8, 2020Updated 5 years ago
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 5 years ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆57May 1, 2025Updated last year
- ☆13Mar 28, 2025Updated last year