CellTracker: An Automated Toolbox for Single-Cell Segmentation and Tracking in Microscopy Images
☆20Dec 2, 2020Updated 5 years ago
Alternatives and similar repositories for CellTracker
Users that are interested in CellTracker are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Feb 3, 2018Updated 8 years ago
- This code was submitted to Cell Tracking Challenge, ISBI 2020.☆14May 19, 2021Updated 5 years ago
- ImageJ plugin for building figures☆16Sep 13, 2023Updated 2 years ago
- Tensorflow and Pytorch Version of Malis Loss☆17Nov 8, 2020Updated 5 years ago
- A Micro-Manager plugin that loads easily reconfigurable user interfaces.☆11Aug 30, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- 3D segmention tool☆13Apr 6, 2023Updated 3 years ago
- ☆18May 26, 2023Updated 3 years ago
- [ECCV 2022] Official PyTorch implementation of the paper - Graph Neural Network for Cell Tracking in Microscopy Videos☆81Nov 30, 2022Updated 3 years ago
- ☆15Dec 13, 2020Updated 5 years ago
- A python algorithm for tracking cells in 3D deforming organs☆70Nov 13, 2025Updated 8 months ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆27Sep 26, 2024Updated last year
- UdemyのDjango講座のソースコードです☆10May 8, 2025Updated last year
- ImageJ plugin suite for image feature extraction☆10Dec 17, 2015Updated 10 years ago
- Next generation of SuRVoS☆10Oct 11, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- MethodsJ2☆14May 6, 2022Updated 4 years ago
- Cell tracking using TensorFlow and BayesianTracker☆23Jan 17, 2022Updated 4 years ago
- CloudReg☆11Apr 5, 2024Updated 2 years ago
- A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data☆200Updated this week
- ☆45Jul 10, 2026Updated last week
- napari plugin for trackastra☆18Updated this week
- ☆15Sep 11, 2023Updated 2 years ago
- A friendly introduction to GitHub as part of @OpenDataManchester's Pick N Mix series.☆13Jul 28, 2021Updated 4 years ago
- Scripts to extract features of cortical folding from MRI☆12Mar 10, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Board Game to teach co-localization analysis☆15Nov 1, 2024Updated last year
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆77Aug 23, 2021Updated 4 years ago
- A generative model of compositionality in symmetric monoidal (Kleisli) categories☆12Oct 4, 2023Updated 2 years ago
- GPU accelerated 3D image deconvolution using CUDA☆39Jul 18, 2024Updated 2 years ago
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated 3 months ago
- Weakly-Supervised Cell Tracking via Backward-and-Forward Propagation, in ECCV 2020☆11Aug 4, 2020Updated 5 years ago
- From our paper "OSMO: Online Specific Models for Occlusion in Multiple Object Tracking under Surveillance Scene" in ACM Multimedia 2018.☆11Apr 9, 2019Updated 7 years ago
- simple package for augmentation of n-dimensional arrays☆33Aug 10, 2023Updated 2 years ago
- Demonstration and tutorial notebooks for the Higra library☆13Sep 29, 2025Updated 9 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆12Mar 25, 2022Updated 4 years ago
- 《统计学习方法_李航》每章算法的具体实现(不依赖与其他库)☆11Feb 20, 2017Updated 9 years ago
- Motion Deblurring via Spatial-Temporal Collaboration of Frames and Events☆16Jun 4, 2025Updated last year
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Jun 23, 2021Updated 5 years ago
- ☆12Sep 8, 2020Updated 5 years ago
- This is the implementation of Embedded Prompt Tuning(EPT).☆14Feb 10, 2025Updated last year
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 5 years ago