Alternatives and similar repositories for dingo

Users that are interested in dingo are comparing it to the libraries listed below

• GeomScale / volesti
  Practical volume computation and sampling in high dimensions
  ☆167Updated last month
• nrnb / GoogleSummerOfCode
  Main documentation site for NRNB GSoC project ideas and resources
  ☆142Updated 5 months ago
• ginkgobioworks / geckopy
  Enzyme-constrained genome-scale models in python
  ☆28Updated last year
• biosustain / Maud
  Enzyme models that take into account kinetics, allostery and thermodynamics
  ☆27Updated 9 months ago
• Toepfer-Lab / cobramod
  CobraMod is a Python 3 open-source package which enables modifying and extending genome-scale metabolic models with metabolic pathway inf…
  ☆15Updated last month
• jdbrunner / surfin_fba
  Dynamic FBA for use with COBRApy metabolic models
  ☆10Updated last year
• klamt-lab / straindesign
  StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy
  ☆42Updated 3 months ago
• segrelab / cometspy
  Python interface for running COMETS simulations and analyzing the results
  ☆12Updated 4 months ago
• opencobra / m_model_collection
  A collection of M models downloaded from published studies
  ☆16Updated 9 years ago
• cdanielmachado / framed
  framed: a metabolic modeling package for python
  ☆26Updated 5 years ago
• RamanLab / metquest
  Enumerating biosynthetic pathways in metabolic networks
  ☆12Updated 4 months ago
• ModelSEED / ModelSEEDpy
  Python package for building and analyzing models using ModelSEED
  ☆23Updated 2 months ago
• mmundy42 / mackinac
  Mackinac: A bridge between ModelSEED and COBRApy
  ☆19Updated 6 years ago
• segrelab / comets
  Computation of Microbial Ecosystems in Time and Space
  ☆24Updated last week
• cdanielmachado / reframed
  ReFramed: metabolic modeling package
  ☆59Updated 2 months ago
• AlmaasLab / BiGMeC
  BiGMeC - Biosynthetic Gene cluster Metabolic pathway Constructor
  ☆15Updated 2 years ago
• franciscozorrilla / EMBOMicroCom
  Metabolic modeling tutorial for EMBO practical course: Metabolite and species dynamics in microbial communities 2022
  ☆13Updated last year
• draeger-lab / ModelPolisher
  ModelPolisher accesses the BiGG Models knowledgebase to annotate SBML models.
  ☆23Updated 5 months ago
• EPFL-LCSB / pytfa
  A Python 3 implementation of Thermodynamics-based Flux Analysis
  ☆39Updated 5 months ago
• rcolpo / pgp_reconstruction
  Pathway-Guided Pruning Reconstruction of Genome-Scale Metabolic Models
  ☆12Updated last year
• danielriosgarza / MAMBO
  ☆11Updated 5 years ago
• ecocyc / PythonCyc
  ☆24Updated 8 months ago
• cnapy-org / CNApy
  An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced feat…
  ☆56Updated 4 months ago
• kelwyres / Bactabolize
  ☆38Updated 2 weeks ago
• opencobra / COBRA.tutorials
  Repository of tutorials for The COBRA Toolbox
  ☆22Updated last week
• lobolab / mergem
  mergem is a python package and command-line tool for merging, comparing, and translating genome-scale metabolic models
  ☆13Updated 6 months ago
• cBioPortal / GSoC
  Documentation repository of Google Summer of Code (GSoC) project ideas for cBioPortal and related projects
  ☆135Updated 4 months ago
• BioSystemsUM / MEWpy
  Metabolic Engineering Workbench
  ☆40Updated last year
• nixeimar / Apothesis
  Apothesis: A kinetic Monte Carlo software for deposition processes
  ☆22Updated 3 weeks ago
• SynBioDex / SBOL-utilities
  Command-line utilities and scripts for manipulating SBOL data
  ☆18Updated this week