Alternatives and similar repositories for tracking

Users that are interested in tracking are comparing it to the libraries listed below

• CSBDeep / CSBDeep_website
  ☆40Updated 5 years ago
• SIP-AAU / Magni
  A package for AFM image reconstruction and compressed sensing in general
  ☆43Updated 6 years ago
• pyimreg / python-register
  Linear and non-linear image registration methods, using scipy and numpy.
  ☆63Updated 12 years ago
• CovertLab / DeepCell
  ☆51Updated 7 years ago
• jr0th / segmentation
  Code for my master's thesis. Instance segmentation of fluorescence microscopy images with deep learning.
  ☆43Updated 7 years ago
• fiji / VIB
  ☆14Updated last year
• pearu / iocbio
  Automatically exported from code.google.com/p/iocbio
  ☆16Updated 10 years ago
• rmsouza01 / iamxt
  This is an alpha version of the Max-tree toolbox.
  ☆13Updated 5 years ago
• lmb-freiburg / Unet-Segmentation
  The U-Net Segmentation plugin for Fiji (ImageJ)
  ☆89Updated 3 years ago
• Fafa87 / cellstar
  Algorithm for round cells identification in the brightfield microscopy images.
  ☆21Updated 2 years ago
• johannesu / cnn-cells
  Cell detection using a convolutional neueral network
  ☆27Updated 6 years ago
• trakem2 / TrakEM2
  ImageJ plugin for morphological data mining, 3D modeling and image stitching, registration, editing and annotation.
  ☆32Updated 2 months ago
• CellCognition / cecog
  A fast and cross-platform image analysis framework for fluorescence time-lapse microscopy and bioimage informatics.
  ☆45Updated last year
• ELEKTRONN / ELEKTRONN
  A highly configurable toolkit for training 3D/2D CNNs and general Neural Networks (superceded by https://github.com/ELEKTRONN/elektronn3)
  ☆40Updated 3 years ago
• soudry / ROI_detect
  Automatic ROI Detection
  ☆19Updated 10 years ago
• imodpasteur / ANNA-PALM
  Accelerating Single Molecule Localization Microscopy with Deep Learning
  ☆53Updated 2 years ago
• billkarsh / Alignment_Projects
  Aligner for large scale serial section image data
  ☆16Updated 2 years ago
• soft-matter / trackpy-examples
  sample images, examples, and speed tests for trackpy
  ☆22Updated 5 months ago
• adwanner / PyKNOSSOS
  PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…
  ☆18Updated 5 years ago
• smithk / cidre
  A general illumination correction method for optical microscopy.
  ☆42Updated 4 years ago
• carpenterlab / 2019_caicedo_dsb
  Analysis of results of the Data Science Bowl 2018
  ☆22Updated 5 years ago
• hammerlab / cytokit
  Microscopy Image Cytometry Toolkit
  ☆114Updated 3 years ago
• bene51 / gpu_deconvolution
  C and NVidia CUDA code for multi-view deconvolution
  ☆11Updated 9 years ago
• fiji / microscope-image-quality
  TensorFlow-based classifier for microscope image focus quality.
  ☆18Updated 3 years ago
• alexis-mignon / pydeconv
  Blind deconvolution module in python
  ☆19Updated 13 years ago
• fordanic / openslide-matlab
  A MATLAB library providing bindings to the C library OpenSlide (https://github.com/openslide/openslide) used for reading whole-slide imag…
  ☆18Updated 6 years ago
• torms3 / DataProvider
  ☆11Updated 5 years ago
• AllenCellModeling / pytorch_integrated_cell
  Integrated Cell project implemented in pytorch
  ☆44Updated last month
• wnd-charm / wnd-charm
  A generalized pattern recognition system for images developed by the Goldberg group at the NIH/NIA.
  ☆96Updated 2 years ago
• janelia-flyem / gala
  Automatic segmentation of electron microscopy volumes
  ☆77Updated 4 years ago