DeepTrackAI / DeepTrack2Links
DeepTrack2 is a modular Python library for generating, manipulating, and analyzing image data pipelines for machine learning and experimental imaging.
☆211Updated this week
Alternatives and similar repositories for DeepTrack2
Users that are interested in DeepTrack2 are comparing it to the libraries listed below
Sorting:
- This is the official implementation of our publication "Deep learning enables fast and dense single-molecule localization with high accur…☆110Updated 2 years ago
- Python control of micro-manager for customized data acquisition☆173Updated 3 weeks ago
- GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data☆231Updated 6 months ago
- Transformer-based cell tracking for live-cell microscopy☆91Updated this week
- The python-microscopy environment - an open-source package for light microscopy☆91Updated last month
- A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…☆98Updated this week
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆80Updated 3 weeks ago
- A collection of tools for painting super-resolution images☆129Updated this week
- An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.☆74Updated last month
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆85Updated last week
- Segment Anything for Microscopy☆590Updated 2 weeks ago
- ☆43Updated 4 years ago
- TrackMate is your buddy for your everyday tracking.☆209Updated 3 weeks ago
- Accelerating Single Molecule Localization Microscopy with Deep Learning☆51Updated 2 years ago
- Cell tracking and segmentation software☆140Updated 2 weeks ago
- Track cells and build cell lineages☆35Updated last year
- A collection of useful python utilities from True North Intelligent Algorithms☆41Updated last week
- Non-comprehensive list of projects and resources related to open microscopy.☆149Updated 3 months ago
- ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging☆102Updated 7 years ago
- A python algorithm for tracking cells in 3D time lapse images.☆61Updated last week
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆50Updated last year
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆29Updated last year
- Combined Repos from DAIN and Zooming SlowMo☆21Updated 2 years ago
- ☆31Updated 3 years ago
- Particle tracking by solving linear assignment problem.☆57Updated 2 weeks ago
- Omnipose: a high-precision solution for morphology-independent cell segmentation☆119Updated 2 weeks ago
- Image restoration for fluorescence microscopy☆315Updated 11 months ago
- A python extension for the automatic alignment of a source image or a stack (movie) to a target image/reference frame.☆91Updated 10 months ago
- Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…☆149Updated 2 months ago
- Python implementation of the Fourier Ring Correlation (FRC) to determine image resolution☆15Updated 10 months ago