python functions for simulating optical transfer functions
☆86Apr 8, 2024Updated 2 years ago
Alternatives and similar repositories for pyotf
Users that are interested in pyotf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆59May 20, 2024Updated 2 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆51Apr 9, 2026Updated 5 months ago
- A convex 3D deconvolution algorithm for low photon count fluorescence imaging☆34Feb 9, 2022Updated 4 years ago
- SLM binary mask generator for Lattice Light Sheet microscopy☆12Dec 2, 2021Updated 4 years ago
- ☆12May 4, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- GPU accelerated beam propagation tools for biological light tissue simulations☆38Sep 29, 2018Updated 7 years ago
- code of the registration and deconvolution project☆36Jun 10, 2021Updated 5 years ago
- Information driven structured illumination microscopy using noise-controlled image reconstructions☆13Apr 16, 2021Updated 5 years ago
- 3D Structured illumination microscopy (3D-SIM) reconstruction software☆33Oct 2, 2024Updated last year
- CUDA-accelerated reconstruction for 3D-structured-illumination☆13Nov 24, 2025Updated 9 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Aug 22, 2024Updated 2 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆74Sep 7, 2026Updated last week
- Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise☆12Jun 15, 2026Updated 3 months ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆48Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Lattice light-sheet post-processing utility.☆30Sep 7, 2026Updated last week
- Dataset EXploration & Processing☆33May 11, 2023Updated 3 years ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Mar 2, 2019Updated 7 years ago
- Collection of literature, math, etc. for Structured Illumination Microscopy☆10Apr 23, 2019Updated 7 years ago
- Differentiable wave optics using JAX! Documentation can be found at https://chromatix.readthedocs.io☆216Aug 20, 2026Updated last month
- OpenSIM matlab code☆60Apr 7, 2016Updated 10 years ago
- [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan☆14May 13, 2020Updated 6 years ago
- Create 3D/4D animations using a natural language-based syntax☆60Jun 6, 2025Updated last year
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- This python package allows the user to retrieve the wavefront aberrations in an optical system using the powerful tool of Phase Diversity…☆21Apr 5, 2023Updated 3 years ago
- ☆23Mar 26, 2021Updated 5 years ago
- TensorFlow Deconvolution for Microscopy Data☆93Apr 29, 2022Updated 4 years ago
- ☆13Nov 9, 2015Updated 10 years ago
- Python library for control of microscope devices, supporting hardware triggers and distribution of devices over the network for performan…☆85Sep 9, 2026Updated last week
- Python samples for Micro-Manager: image acquisition and microscope control system☆24Sep 26, 2019Updated 6 years ago
- A writer and reader for NGFF OME-Zarr datasets☆14Nov 2, 2021Updated 4 years ago
- GPU accelerated 3D image deconvolution using CUDA☆39Jul 18, 2024Updated 2 years ago
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆80Sep 7, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆10Nov 29, 2024Updated last year
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Jun 21, 2024Updated 2 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆23Apr 1, 2025Updated last year
- Free Analysis and Interactive Reconstruction for Structured Illumination Microscopy☆104Updated this week
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated 8 months ago
- Automatically exported from code.google.com/p/iocbio☆16Aug 5, 2015Updated 11 years ago
- daoSPIM microscope project: software and hardware☆12Jul 6, 2023Updated 3 years ago