zitmen / thunderstorm
ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging
☆95Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for thunderstorm
- STORM movie analysis code☆116Updated 8 months ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆38Updated 3 weeks ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆35Updated 6 years ago
- ☆64Updated last month
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆25Updated 2 months ago
- Microscope control software☆66Updated last year
- Automatic Correction for sCMOS-related Noise☆17Updated 3 years ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆44Updated 6 months ago
- Things we use regularly☆29Updated 2 months ago
- Zernike Optimized Localization Algorithm for 3D single molecule localizations☆14Updated 2 years ago
- Single-Molecule Localization Microscopy - Software Benchmarking - Challenge 2016☆15Updated 5 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆60Updated 2 weeks ago
- Official implementation of the Optica 2018 paper "Deep-STORM: super-resolution single-molecule microscopy by deep learning"☆51Updated 4 years ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆16Updated this week
- A collection of tools for painting super-resolution images☆110Updated last month
- Detection of Molecules plugin for ImageJ, Utrecht University☆14Updated 2 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆22Updated 3 years ago
- TensorFlow Deconvolution for Microscopy Data☆90Updated 2 years ago
- ☆21Updated 4 months ago
- code of the registration and deconvolution project☆33Updated 3 years ago
- Drift estimation☆15Updated last year
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆15Updated this week
- Image acquisition software for mesoSPIM light-sheet microscopes.☆37Updated this week
- SOFI simulation tool: a software package for simulating and testing super-resolution optical fluctuation imaging☆15Updated 7 years ago
- ☆15Updated 5 years ago
- [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan☆14Updated 4 years ago
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Updated 5 months ago
- The python-microscopy environment - an open-source package for light microscopy☆84Updated last week
- ☆13Updated last year