David-Peede / BIOL1435
Resources for Brown University's BIOL 1435 course.
☆20Updated last year
Alternatives and similar repositories for BIOL1435
Users that are interested in BIOL1435 are comparing it to the libraries listed below
Sorting:
- Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data☆36Updated last year
- starfish: a modular toolkit for giant mobile element annotation☆29Updated 5 months ago
- biodiversity genomics course by Nicol Rueda, Karin Näsvall and Joana Meier from the Wellcome Sanger Institute☆50Updated 3 months ago
- Interim data for the Darwin Tree of Life Project☆33Updated 4 years ago
- Analysis of convergence between organismal traits and DNA/protein sequences☆52Updated last month
- A comparative genomics workflow using Nextflow, conda, Julia and R☆43Updated last year
- kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.☆39Updated last year
- Using ggtree to build phylogenetic trees☆46Updated 6 months ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆74Updated 4 years ago
- Automated de novo assembly of whole chloroplast genomes.☆45Updated 7 months ago
- Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics☆21Updated last year
- Synteny Imager☆62Updated 8 months ago
- Tutorial about R package PopGenome☆41Updated 6 years ago
- Software for ancestry estimation in unrelated individuals☆18Updated last week
- SambaR: Snp datA Management and Basic Analyses in R☆28Updated last week
- A massively parallel tool for model selection and tree inference on thousands of genes☆47Updated last year
- LaTeX and associated files for lecture notes used in EEB 5348 at the University of Connecticut☆35Updated last year
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆65Updated 7 months ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆34Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆59Updated 6 months ago
- a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies☆69Updated last week
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- ☆39Updated last year
- k-mer learning materials☆70Updated 2 months ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 5 years ago
- ☆71Updated 2 months ago
- Inferring bacterial recombination rates from large-scale sequencing datasets.☆42Updated 2 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆49Updated last week
- Ancient microbiome snakemake workflow☆24Updated last month
- ☆70Updated last year