DataBiosphere / terra-interoperability-model
Common data model proposal for biomedical research intended to facilitate and encourage data sharing and reuse
☆19Updated last year
Related projects: ⓘ
- This repo is for the metadata schemas associated with the HCA☆64Updated this week
- Extensible specification for representing and uniquely identifying biological sequence variation☆80Updated last week
- GA4GH Variation Representation Python Implementation☆50Updated this week
- A repository for the schemas used for the Data Repository Service.☆60Updated last week
- A Python library for interacting with the Galaxy API☆85Updated last month
- WDL and CWL compiler for the DNAnexus platform☆32Updated last week
- non-redundant, compressed, journalled, file-based storage for biological sequences☆39Updated 2 weeks ago
- Browser for ExAC consortium data☆106Updated 2 years ago
- A collection of Python clients and accessory scripts for interacting with the Cromwell☆22Updated last year
- The Terra Data Repository built by the Jade team.☆13Updated this week
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆73Updated last month
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆33Updated 2 months ago
- Galaxy Workflows maintained by the Intergalactic Workflow Commission☆28Updated this week
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆41Updated last year
- Library for manipulating genomic variants and predicting their effects☆81Updated 2 months ago
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆76Updated 2 months ago
- FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine☆29Updated 6 months ago
- GA4GH Beacon specification.☆32Updated last year
- An information model for representing variant annotations.☆15Updated this week
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆70Updated last month
- biotoolsSchema : Tool description data model for computational tools in life sciences☆36Updated 7 months ago
- Annotation of VCF variants with functional impact and from databases (executable+library)☆56Updated last week
- WDL plugin for pytest☆48Updated last year
- the GMOD database schema☆37Updated 2 months ago
- cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.☆18Updated last year
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆62Updated 2 months ago
- Associations of genomic features, drugs and diseases☆48Updated last year
- Scalable gVCF merging and joint variant calling for population sequencing projects☆145Updated 5 months ago
- The WES API is a standard way to run and manage portable workflows.☆82Updated 2 months ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year