DataBiosphere / terra-interoperability-model
Common data model proposal for biomedical research intended to facilitate and encourage data sharing and reuse
☆20Updated 2 years ago
Alternatives and similar repositories for terra-interoperability-model:
Users that are interested in terra-interoperability-model are comparing it to the libraries listed below
- Extensible specification for representing and uniquely identifying biological sequence variation☆86Updated this week
- GA4GH Variation Representation Python Implementation☆53Updated last week
- This repo is for the metadata schemas associated with the HCA☆67Updated this week
- An information model for representing variant annotations.☆18Updated this week
- non-redundant, compressed, journalled, file-based storage for biological sequences☆40Updated this week
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆63Updated last month
- A collection of reusable WDL tasks. Category:Other☆86Updated this week
- The WES API is a standard way to run and manage portable workflows.☆83Updated 5 months ago
- Collect of SO Ontologies☆99Updated 3 months ago
- A collection of Python clients and accessory scripts for interacting with the Cromwell☆22Updated 2 years ago
- CLI for interacting with Cromwell servers☆53Updated 11 months ago
- http://bam.iobio.io☆46Updated 9 months ago
- a place for GA4GH-related wiki pages☆16Updated 7 years ago
- The Terra Data Repository built by the Jade team.☆13Updated this week
- FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine☆31Updated 11 months ago
- An iobio app for examining gene variants☆22Updated 6 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- A repository for the schemas used for the Data Repository Service.☆60Updated 2 weeks ago
- [in development] Proof-of-Concept variation translation, validation, and registration service☆13Updated this week
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆70Updated 3 months ago
- hgvslib provides functions to parse and compare the equivalency of variant strings described according to Human Genome Variation Society …☆18Updated 2 years ago
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆33Updated 8 months ago
- Generic Interactive Variant Analysis browser☆29Updated 2 years ago
- Associations of genomic features, drugs and diseases☆48Updated 2 years ago
- Annotation of VCF variants with functional impact and from databases (executable+library)☆59Updated this week
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆81Updated 5 months ago
- Mutation Identification Pipeline. Read the latest documentation:☆44Updated last year
- Server wrapper that turns command line tools into web services☆62Updated 6 years ago
- Browser for ExAC consortium data☆106Updated 3 years ago
- WDL plugin for pytest☆48Updated last year