D-I-L / django-chicpLinks
☆9Updated 8 years ago
Alternatives and similar repositories for django-chicp
Users that are interested in django-chicp are comparing it to the libraries listed below
Sorting:
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- A tool for Read Multi-Mapper Resolution☆23Updated 8 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 2 months ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- Chromatin segmentation in R☆19Updated 7 years ago
- The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating fro…☆36Updated last year
- Exon-exon splice junctions across SRA☆42Updated 4 years ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆39Updated 2 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- Tools to handle reads sequenced with unique molecular identifiers (UMIs).☆30Updated 8 years ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 4 years ago
- ☆12Updated 2 months ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- JAMM Peak Finder for Sequencing Datasets☆29Updated 5 years ago
- ☆25Updated 4 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆43Updated 3 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- Personal diploid genome creation and coordinate conversion☆30Updated 4 months ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- A curated list of awesome clonality and tumor heterogeneity resources☆15Updated 6 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- Fast fusion detection using kallisto☆80Updated last month
- conda recipes for genomic data☆85Updated 4 years ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 8 years ago