ComputationalAgingLab / ComputAgeLinks
A library for full-stack aging clocks design and benchmarking.
☆34Updated 10 months ago
Alternatives and similar repositories for ComputAge
Users that are interested in ComputAge are comparing it to the libraries listed below
Sorting:
- ☆34Updated 10 months ago
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆122Updated 2 months ago
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆169Updated last month
- ☆42Updated 4 months ago
- Pytorch implementation of the Borzoi model from Calico, and Flashzoi, a 3x faster Borzoi enhancement.☆88Updated 3 weeks ago
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆43Updated 5 months ago
- LLM-powered peronalised daily lists of scientific papers☆74Updated last month
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆86Updated 3 years ago
- gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.☆304Updated last month
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆73Updated 2 weeks ago
- Biological sequence analysis for the modern age.☆257Updated last month
- TF MOtif Discovery from Importance SCOres☆158Updated last month
- Fast-ish (and correct!) quantile normalization in Python.☆31Updated 6 months ago
- RNA-seq prediction with deep convolutional neural networks.☆211Updated 3 months ago
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆51Updated 3 months ago
- Computational Optimization of DNA Activity (CODA)☆65Updated 8 months ago
- ☆23Updated last year
- Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/☆289Updated 5 months ago
- Draw RNA secondary structures in python.☆49Updated 5 months ago
- BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.☆216Updated 3 months ago
- predicting expression effects of human genome variants ab initio from sequence☆132Updated 10 months ago
- Materials for Transcripromics Data Analysis course at Moscow State University☆73Updated last year
- A Python-based compendium of GPU-optimized aging clocks.☆114Updated last week
- Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.☆131Updated 10 months ago
- pyComBat is a Python 3 implementation of ComBat, one of the most widely used tool for correcting technical biases, called batch effects, …☆89Updated last year
- Peptide-MHC I binding affinity prediction☆221Updated 6 months ago
- Explainable AI for Bioinformatics☆126Updated 2 years ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆57Updated 3 years ago
- InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.☆111Updated last week
- The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)☆36Updated 2 years ago