ComputationalAgingLab / ComputAge
A library for full-stack aging clocks design and benchmarking.
☆29Updated 3 weeks ago
Alternatives and similar repositories for ComputAge:
Users that are interested in ComputAge are comparing it to the libraries listed below
- ☆10Updated 8 months ago
- Free online course on computational biology of aging driven by Jupyter book and supported by Skoltech.☆16Updated last year
- Materials for Transcripromics Data Analysis course at Moscow State University☆63Updated 10 months ago
- This is repo for the materials of the BI2023 python course☆20Updated 9 months ago
- Lo-Hi Splitter for Modern Splits of Molecular Datasets☆53Updated 4 months ago
- This repository contains the code for our manuscript - 'The evolution, evolvability, and engineering gene regulatory DNA'☆94Updated last year
- gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.☆245Updated this week
- Draw RNA secondary structures in python.☆46Updated 5 months ago
- GENA-LM is a transformer masked language model trained on human DNA sequence.☆181Updated last month
- python tools for TCR:peptide-MHC modeling and analysis☆69Updated 10 months ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆166Updated 11 months ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆66Updated this week
- Python package to perform enrichment analysis from omics data.☆179Updated 2 weeks ago
- Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/☆279Updated this week
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆115Updated 2 years ago
- Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.☆106Updated 2 weeks ago
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆34Updated 3 months ago
- A list of tools on proteomics using deep learning☆91Updated 9 months ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆77Updated 2 years ago
- InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.☆68Updated 2 weeks ago
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆46Updated last year
- Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotat…☆138Updated this week
- ☆72Updated last year
- A visible neural network model for drug response prediction☆139Updated last year
- 📚 Tools and databases for analyzing HLA and VDJ genes.☆217Updated 2 months ago
- Models and datasets for perturbational single-cell omics☆148Updated 2 years ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆54Updated 2 weeks ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆49Updated 2 years ago
- ☆115Updated 7 months ago
- Computational Optimization of DNA Activity (CODA)☆55Updated last month