ChristinaVasil / snpQT
Make your SNPs cute!
☆8Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for snpQT
- Tool for modelling of mitochondrial heteroplasmy☆16Updated 4 months ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆15Updated last month
- R package to explore active transposable elements with RNA-seq data☆18Updated last year
- ExTraMapper is a tool to find Exon and Transcript-level Mappings of a given pair of orthologous genes between two organisms using sequenc…☆9Updated 2 years ago
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆21Updated 2 weeks ago
- ☆11Updated 7 months ago
- ☆23Updated 3 years ago
- ☆11Updated 8 months ago
- ☆20Updated 8 months ago
- Software used to develop the TCMA database associated with 10.1016/j.chom.2020.12.001.☆12Updated 11 months ago
- ☆21Updated 2 weeks ago
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Updated 3 years ago
- ☆15Updated 2 years ago
- A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.☆18Updated last year
- Software for hybridization capture bait design☆11Updated 8 months ago
- Main repository for Drews et al. (Nature, 2022)☆38Updated last year
- ERVcaller is a tool designed to accurately detect and genotype non-reference unfixed endogenous retroviruses (ERVs) and other transposabl…☆14Updated 10 months ago
- A Snakemake pipeline for Quality Control of Whole Genome Sequencing data☆13Updated 2 years ago
- Script used to identify de novo variants from sequencing data.☆12Updated 7 years ago
- Enabling differential allele-specific analysis☆11Updated 2 years ago
- ☆24Updated 2 years ago
- Repo for generating custom blacklist for reads originating from mitochondrial DNA to nuclear genome☆17Updated 2 years ago
- HiC for copy Number variation and Translocation detection☆35Updated 3 years ago
- ☆22Updated last year
- Accurate haplotype construction and detection of selection signatures enabled by 889 high quality pig genome sequences☆11Updated last year
- Singularity port of HLA typing based on an input exome BAM file and is currently infers infers alleles for the three major MHC class I (…☆13Updated 7 years ago
- ☆19Updated 3 years ago
- ☆21Updated 5 months ago
- Method used in the study on germline mutation rate estimation in 68 species of vertebrates.☆13Updated 3 years ago
- Extract Sequence from Genome According to Annotation File☆29Updated last week