ChimPipe: Accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data
☆15Jan 22, 2026Updated 7 months ago
Alternatives and similar repositories for ChimPipe
Users that are interested in ChimPipe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Nextflow pipeline to extend reference annotation with nanopore reads, classify novel genes (mRNAs vs lncRNAs).☆17Updated this week
- Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.☆15Oct 15, 2018Updated 7 years ago
- ☆12May 6, 2021Updated 5 years ago
- SV genotyper for long reads with a variation graph☆16Apr 15, 2026Updated 4 months ago
- A python package for showing JBrowse views☆27Jul 22, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Long read to rMATS☆32May 5, 2023Updated 3 years ago
- ☆14Sep 26, 2019Updated 6 years ago
- Merge transcriptome read-to-genome alignments into non-redundant transcript models☆20Jan 21, 2026Updated 7 months ago
- RILseq computational protocol☆10Apr 3, 2022Updated 4 years ago
- Nanopore direct RNA basecaller☆11Oct 27, 2022Updated 3 years ago
- A fully convolutional architecture for basecalling nanopore RNA sequencing data☆12Sep 26, 2024Updated last year
- FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.…☆12May 8, 2025Updated last year
- Collects all Discord server member data and exports to an Excel spreadsheet and also to an HTML file with avatars displayed☆13Jul 8, 2023Updated 3 years ago
- Computer simulator of multiplex tissue images from a set of user-defined parameters☆10Dec 13, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- RADIA: RNA and DNA Integrated Analysis for Somatic Mutation Detection☆29Oct 1, 2020Updated 5 years ago
- GEMTools main repository☆17Jun 21, 2022Updated 4 years ago
- Some power wifi/dev stuff for Flipper Zero by B4☆15Oct 19, 2022Updated 3 years ago
- LLM based autonomous agent that does online comprehensive research on any given topic